Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02571 ATGATGTCTGGGAAGGAGGATAGAGAGAATATTTTAAGGGCCAGGGCCACTGGGAAAGCCGTTCTGACAAGCTCTTTTAGGCTTTTAGGGTCTCATCATCCTGGTGTGGTTTTAACATTTCCTGTTTACAAATCTAAGCTTCCTCCAAATCCAACATTGGAAGAACGCATTAAAGCAACAACAAGGCTCCAATTGTCCAACATAGCACAGGTGACTTTGTCAATTATAGTCTCATTGCTTCCAGTGATAACCAAATACTGTGACAGCTTTTGCTTCATTCCCAATTCATGGAGTTATGGAGCTATTGTAATATGCATCCATGACAAAGTCATAGAAGTGACGGACATGACTGAGCTAGAAACTAATGAGACAGAATGTGGTCATATTGTTGAATTAGATTTAGTTTACCATTCACTGAATTCAAGTATGCTTGGAGTTGTTGCAGTTAGATATAATGTCTCACACTCTCAACTCACTCTCCCCCAAAACAGTAGTAGAGCTCAACCTTCTCAGTCTTACAGAGCCAGTGTCATCGACACCGCACTGTCGCCATCTCGTCGTCGGGTCTTCTGCGTCCGCCAGTGTCTCCTTCGTAGCATTGTGTTGTCTACACGCCTTCACCGCTGTCGCCTTCACTGCTTGTATCTGCTTGCTGCTAGCCCCCAGTCATTACCATGCCTCCTCTGTCTGGGTTTCATCTTGGCTCTATCGTGTCCTGCCCCCTCTGTGTCTGGTGTTGGTGTTCTTCTTCTATTCTTGCTTTGGTGGTGTCTGTATTAA 780 0.4474 MMSGKEDRENILRARATGKAVLTSSFRLLGSHHPGVVLTFPVYKSKLPPNPTLEERIKATTRLQLSNIAQVTLSIIVSLLPVITKYCDSFCFIPNSWSYGAIVICIHDKVIEVTDMTELETNETECGHIVELDLVYHSLNSSMLGVVAVRYNVSHSQLTLPQNSSRAQPSQSYRASVIDTALSPSRRRVFCVRQCLLRSIVLSTRLHRCRLHCLYLLAASPQSLPCLLCLGFILALSCPAPSVSGVGVLLLFLLWWCLY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02571 259 ProSiteProfiles CHASE domain profile. 1 57 IPR006189 -
Aip06g02571 259 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 61 - -
Aip06g02571 259 PANTHER HISTIDINE KINASE 4 1 61 - -
Aip06g02571 259 Pfam CHASE domain 1 56 IPR006189 -
Aip06g02571 259 Gene3D CHASE domain 1 103 IPR042240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02571 Aip-Chr6 113597179 113602687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02571 1 60 Histidine Kinase Gene Family AT2G01830 83.333 1.38e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02571 K14489 - fve:101311470 112.079