Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02567 ATGGTTCGTGCTATAAAGGCTGCAATTGGTGATGGGGTGTTGACTTTCATGTGGGTGTTCTGTTCCTCCATGTTGGGGATAGCTTCAAGCTCCATAACAAGATTTCTTGACATTCAGCACCTCCATTACAATGGCTTCCCTTACCCTTCATTCCTTGTCACAACTTTCCTTGTTTTCGTACTTGTCTTTGTGTTCACCATCATTGGCAATGCCTTGGGTGGTGCCAGCTTCAATCCCACTGGCACTGCTGCGTTCTATGCTATTGGTCTCGGCTCTGACTCACTCTTCTCCATGGCTCTGCGCTTCCCTGCCCAGGCTCTTGGTGCTGCTGGTGGAGCTTTGGCAATTATGGAGATAATTCCTTCGAAATACAAACACATGATGGGAGGCCCTTCATTGAAAGTGGATCTGCACACCGGTGCTGTTGTTGAGGGAGTGTTGACTTTTGTGATCACTTTTGCTGTGCTCTACATAATCCTCAAGGGCCCTCGTAGTGACTTGCTCAAGACTTGGTTGCTCGCCATGTCGACCGTCGCACTAGTCATGGTTGGATCGGCTTACACCGGTCCATCCATGAATCCTGCCAATGCGTTTGGTTGGGCATACCTAAATAACTGGCACAACACATGGGATCAATTCTATGTATACTGGATCTGCCCCTTCGTCGGAGCAATATTTGCCGCATGGTTTTTCCGCGCCATCTTCCCCCCACCAGAAGCTACACAGGAGAAGAAACAGAAGAAAGCATGA 750 0.488 MVRAIKAAIGDGVLTFMWVFCSSMLGIASSSITRFLDIQHLHYNGFPYPSFLVTTFLVFVLVFVFTIIGNALGGASFNPTGTAAFYAIGLGSDSLFSMALRFPAQALGAAGGALAIMEIIPSKYKHMMGGPSLKVDLHTGAVVEGVLTFVITFAVLYIILKGPRSDLLKTWLLAMSTVALVMVGSAYTGPSMNPANAFGWAYLNNWHNTWDQFYVYWICPFVGAIFAAWFFRAIFPPPEATQEKKQKKA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02567 249 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g02567 249 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g02567 249 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g02567 249 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g02567 249 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g02567 249 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g02567 249 Pfam Major intrinsic protein 4 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g02567 249 Gene3D Glycerol uptake facilitator protein. 2 248 IPR023271 -
Aip06g02567 249 PANTHER AQUAPORIN SIP1-1 3 246 - -
Aip06g02567 249 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
Aip06g02567 249 SUPERFAMILY Aquaporin-like 4 244 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02567 Aip-Chr6 113417046 113420279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02567 4 249 Major Intrinsic Protein MIP AT5G18290 55.466 1.96e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02567 K09875 - gmx:100792787 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02567 06 113417046 113420279 Aip06g02567 06 113417046 113420279 ECH