Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02565 ATGCAAGTGCAAATTGAAAAGATGGATCTCAAAAGCCTCTTCACATTTTTACTCTTATTGATGCCATCATTCTGTTCCTCTCAATCCCTGACGATTAACAACATTTTCTTTACTCATCGTAAGATACTTCCAAAACAAAAATCCAATGATAATAATAACAATAACGATGTTACTTCTTATGCTGTCATCTTTGATGCTGGTAGCTCCGGATCTCGTGTTCATGTCTTCCATTTTGATCAGAATCTCAACCTTCTTCATATTGGCAACGAAATTGAGTTTTATAAGAAGATCGAACCCGGTTTGAGTGCATATGCAGATAATCCAGAAGAAGCAGCAGAATCTCTGATTCCACTCTTAGACGAAAGAAGTAACCTGAACGTTCAATCTGATGCAGTAACTGTTATTGATGGAACCCAAGAAGGTTCTTATATGTGGGTGGCACTAAACTATCTACTGGGAAACTTGGGAAACAAGTATTCAAGGACGGTGGGAGTGGTTGATCTTGGAGGTGCATCAGTTCAAATGGCATATGCTATTTCAAAGCACGCAGCTCAAAATGCACCATTACCACCAGATGGACAGGACCCATACATTAAAAATGTCATTCTTAAAGGAACCGAATATAACCTCTATGTTCATAGTTACTTGCGCTATGGTAGTGATGCTGCTCGTGCTGAAATTTTGAACATCACTCATAATTCTGCTAATCCTTGCGTTTTAGCTGACTTTGATGGGACATATGCATACTCAGGAAATGAGTATAGGGCATATGCACCAAGTTCAGGGTCCAGCTTTGAAAAATGCAGGCATATAGTGCGTAAGGTCCTCAAATTGGACGCACCATGTCCATATAATAAAGATTGCACTTTTGGTGGAATATGGAGTGGTGGAGGTGGTAATGGACAAAAAAATCTCTATGTTGCTACGTCTTTCTTTTATATGGCATCACAGACGGGTATAGTTGATCCGAACAAACCCAATTCGAAGGTTATTCCGGCGGATTACAAGGTTGCAGCTAAGAAAGCATGTAATACAAAATATGAGGATGCTGCATCTATTTATCCTCTTATTACCATTGACAGACTTCCTTATGTCTGCATGGATCTCACATACCAATATACATTGCTCGTTGAGGGATTCGGCATAGAACCATGGCAAGAGATTACAGTCACTCAGCAAATTGAATATGAAGATGCTTCCGTAGATGCAAGCTGGCCTCTAGGGAGTGCCATAGAAGCCATATCTTCATTACCTAAATTTGAGCGATTGATGTATTTTATTTAA 1284 0.3949 MQVQIEKMDLKSLFTFLLLLMPSFCSSQSLTINNIFFTHRKILPKQKSNDNNNNNDVTSYAVIFDAGSSGSRVHVFHFDQNLNLLHIGNEIEFYKKIEPGLSAYADNPEEAAESLIPLLDERSNLNVQSDAVTVIDGTQEGSYMWVALNYLLGNLGNKYSRTVGVVDLGGASVQMAYAISKHAAQNAPLPPDGQDPYIKNVILKGTEYNLYVHSYLRYGSDAARAEILNITHNSANPCVLADFDGTYAYSGNEYRAYAPSSGSSFEKCRHIVRKVLKLDAPCPYNKDCTFGGIWSGGGGNGQKNLYVATSFFYMASQTGIVDPNKPNSKVIPADYKVAAKKACNTKYEDAASIYPLITIDRLPYVCMDLTYQYTLLVEGFGIEPWQEITVTQQIEYEDASVDASWPLGSAIEAISSLPKFERLMYFI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02565 427 Pfam GDA1/CD39 (nucleoside phosphatase) family 122 419 IPR000407 GO:0016787
Aip06g02565 427 Pfam GDA1/CD39 (nucleoside phosphatase) family 55 121 IPR000407 GO:0016787
Aip06g02565 427 Gene3D - 46 137 - -
Aip06g02565 427 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 12 121 - -
Aip06g02565 427 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 118 427 - -
Aip06g02565 427 Gene3D Exopolyphosphatase. Domain 2 138 395 - -
Aip06g02565 427 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 135 150 IPR000407 GO:0016787
Aip06g02565 427 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 121 IPR000407 GO:0016787
Aip06g02565 427 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 118 427 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02565 Aip-Chr6 113295007 113302968 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02565 52 416 Calmodulin-binding Proteins AT3G04080 48.411 5.99e-130 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02565 K14641 - gmx:100781628 524.242