Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02564 ATGACATTGTTCTTCCCCAATTTCCATCATATCTTGCATAACTCTAACAATCTAACACTGCAACTTCAAGCTACACAATGCACACTCTGCAACTTCAATGTTCATAAGAAGAAAAATCCTCATCTTGTTCTTAACCAATTCATATCCAGGAAACTAATGATTATGTCTCTCAAGTACTTGTCGTCTTTGATGGATCCCATGAATTTAGACAGCAAGTTCGACTTGTTAAGATTCGTCGTCGTCGTCGCCATCTCTCTCCTCCTCTATCCTATCATCTCCATGGCCACATTGTCCACTACTCTGATCGCTTCCTTCAACTTCTTCTTCGAACCAATATTCAGTAATCGCTTCAGTTTCCATATGAGTGGCGACGATGACATTACTCGTTATACTGATAGCTTGGATGTGGATATTGCTGCTATCGGAGGAGAAGCCGCAATAGATGGTGGCAGCGCTGCGAACGACACGGTAGGGGAGGGAGACGTCGACGACGAAGTCGATCCGGTCTTCATTCTGCCCAAAGATGCGGCAGTCATCGAAGAGAGTTCCACAGCAGAATTGAATGACAAATTGGAAGCGCTTCTTGAGAAGAAGAAGCAAGCTGCCGTCACACCCAGGAAGCTGCCGTTGCACCAAGCCGATCGCGATGACCCTCACACCCAACCCTCTCTCTGTCGCACCCAAACCCTAAATCACTTTCTCATTCACCACTCTCATCACTATTCCACGATTAACTATGCCTGGAACTCTGCCGTCTTCATTTCACCGCGCCTCGAGCTCTGCGGTGCACGATTCACTACGCCTCAAGCTCCGTTTTCTCTTCGTCTTGAGCATCACCGCCTTCAATCTAACCCTGGACACTATACAAACTACAAAGCCTCAGAGCTTGAAACTGTTGTTCTTGCACTTGTATATTTGCAACTCAACACCAAGGCCAATTCCCTGAATACTATATGTAAAAAGTATAAACAATATAAGGGGATAAGAAGATTCCAGCATGGAAGAAATAGTTCCAAGGAGCTTGGACTTCGGAGTTTGATGATAGCAGGCCCTACCAAGAAGGAGTTGAAAGCTAGAGGAATTAACAATGAGCACACTCTTGCTTATCAGAGTCGAGTGGGCCCGGTACAGTGGTTGAAACCATATACAGATGAAACTCTCGTTGAGCTTGGTCAGAAAGGTGTAATGAGTCTTTTAGCTGTTCCAGTGAGCCTTAAGAGTAAAAGACACTCCTCCTCCTTGTATCTCAACTTTGTGAGTGAGCACATAGAGACCCTGATGAAATTGACATGGTGTACAGGAAGTTGGCTCTTGAATCTGGCATCAAGATTTGGGCGCGTGTTCCTGCTCTTGGTCTCAtga 1362 0.4537 MTLFFPNFHHILHNSNNLTLQLQATQCTLCNFNVHKKKNPHLVLNQFISRKLMIMSLKYLSSLMDPMNLDSKFDLLRFVVVVAISLLLYPIISMATLSTTLIASFNFFFEPIFSNRFSFHMSGDDDITRYTDSLDVDIAAIGGEAAIDGGSAANDTVGEGDVDDEVDPVFILPKDAAVIEESSTAELNDKLEALLEKKKQAAVTPRKLPLHQADRDDPHTQPSLCRTQTLNHFLIHHSHHYSTINYAWNSAVFISPRLELCGARFTTPQAPFSLRLEHHRLQSNPGHYTNYKASELETVVLALVYLQLNTKANSLNTICKKYKQYKGIRRFQHGRNSSKELGLRSLMIAGPTKKELKARGINNEHTLAYQSRVGPVQWLKPYTDETLVELGQKGVMSLLAVPVSLKSKRHSSSLYLNFVSEHIETLMKLTWCTGSWLLNLASRFGRVFLLLVS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02564 453 SUPERFAMILY Chelatase 356 429 - -
Aip06g02564 453 Pfam Ferrochelatase 358 429 IPR001015 GO:0004325|GO:0006783
Aip06g02564 453 Coils Coil 184 204 - -
Aip06g02564 453 Gene3D - 347 432 - -
Aip06g02564 453 PANTHER FERROCHELATASE 353 428 IPR001015 GO:0004325|GO:0006783
Aip06g02564 453 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 353 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02564 Aip-Chr6 113229749 113236750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02564 270 334 Core Cell Cycle Gene Families AT1G80370 44.776 7.48e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02564 K01772 - twl:119993101 108.227