Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02563 ATGAAGCCTCCATTGCGTAGCAGGCATCGCAACCTTCGAAGCCACCTTCCGTGGAAGTCACTCACCATTGCAAGTTCCTGGAACAAGGTTGGAGATTCGAGTAGCCCTTCCCGTCGCGAAGTCATTCGTGGAAATCGTAGCCACCGCCACCACTCCTTGTTGTCGCGCACTGTGTTCCCACCGGTGCCAGCCCTGTTTGACCCTTCCACCCCAGCCGCTGGCTTTGTCGCTGCCAGAGTTTTATGGTGGATCCCAGGAATCAGTATTTCTCTCCCCGTTATGGCTGTGGTAGACAACGATGTGGTCTCTAGAGGTTATGTCGATGTTCCATGGGAAAGGAAGATAAACTTAAGGCAGATGAAACAAAGAGGGGGTAAAAAGAAGCTAAAAGCAACGACACGTGCTGGGAGCTGGTGGTTTTTTGTATTGCCAAAGATCTGGGGGCAGTCCAAGGTTGACGGTTCCAGCGAGAACGTGAGAAGTTGCAAGGGAGTTTGCACCCTGGGAAACACATTAGGCAGTAATCGTGGTGTAGTTGTGCGGATGCAGGCTAAACTAGATGATGGAGTTAACCGAGGTGCTGGAATTCAAGAGGATCGTAGCGGTGGAACACAGTCTGAAACAAACGAGACACCGATTGGAGACGGTAAAACTGATACTTGTGATGAATGGGTAGAGGGAGAAGCCACTGAATATCGAGACGTGCTAATATTCACCGAAGCCGATATGATGAGGAAGGTGTTCTGCACGGACGAAGCCGCCTATGAGTTTTACAAGAGATACGGCAAATGCCATGGGTTCGGTATTCGCAAGGGTGACTCAGGAAAGAATGATAAGGGAAGGGTGATTAGGAGGAGGTTTTTTTGCAACAAAGCAGGGCTGAGGCAGTGCAAACATTACGAAAGACTTGACAGGAAGAGGGACCACAGATCGGAGATGCGCACAAACTGTGACACAAAGCTATCAATCTTATGGGATGATGTCAGCAAAATTTGGAGGGTTAGAAAAGTTATACTAGATCACAACCATGATTTAACTCCTATGAGGATGGTTCATATGATCAATAGCTTTAGAGACATGGATTGTTCAGCTAAGGCACAGATTAATGGCATGTAG 1116 0.4821 MKPPLRSRHRNLRSHLPWKSLTIASSWNKVGDSSSPSRREVIRGNRSHRHHSLLSRTVFPPVPALFDPSTPAAGFVAARVLWWIPGISISLPVMAVVDNDVVSRGYVDVPWERKINLRQMKQRGGKKKLKATTRAGSWWFFVLPKIWGQSKVDGSSENVRSCKGVCTLGNTLGSNRGVVVRMQAKLDDGVNRGAGIQEDRSGGTQSETNETPIGDGKTDTCDEWVEGEATEYRDVLIFTEADMMRKVFCTDEAAYEFYKRYGKCHGFGIRKGDSGKNDKGRVIRRRFFCNKAGLRQCKHYERLDRKRDHRSEMRTNCDTKLSILWDDVSKIWRVRKVILDHNHDLTPMRMVHMINSFRDMDCSAKAQINGM 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02563 371 Pfam FAR1 DNA-binding domain 256 346 IPR004330 -
Aip06g02563 371 MobiDBLite consensus disorder prediction 29 48 - -
Aip06g02563 371 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 237 355 - -
Aip06g02563 371 MobiDBLite consensus disorder prediction 198 215 - -
Aip06g02563 371 MobiDBLite consensus disorder prediction 191 219 - -
Aip06g02563 371 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 237 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02563 Aip-Chr6 113210638 113214430 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02563 FAR1 2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02563 - - aip:107647344 535.413