Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02553 ATGGGATCACCGGAATCAAATTTGCCACCAGGTTTTAGGTTCCATCCAACCGATGAAGAACTCATTCTTCACTACCTTAGGAAGAAGGTAGCATCCATACCCTTACCTGTTTCCATCATCGCTGAGGTTGATATCTACAAATTGGATCCATGGGAATTACCAGCTAAGGCTGCGTTTGGTGAGAAAGAATGGTACTTCTTCAGTCCAAGAGACCGGAAGTACCCAAACGGTGCGAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCTACGGGTACCGACAAGACCATAGTGGTGTCGCCGGCGGCCACAGTTACACGTAGAGTAGGCCAAGAGAGCAGCGTTGGTGTCAAGAAGGCTCTTGTTTTCTACAAAGGAAGGCCTCCAAAGGGTGTTAAAACCAATTGGATCATGCACGAATATCGTCTTGTAGACAACAATAGACCCATTAAGCTCAAAGATACCTCCATGAGATTGGATGACTGGGTTCTGTGCCGGATTTATAAGAAGTCGAAATTCTCAGTATCTTCACCGGAGGAATCACCGTCGAGTGAAGTTCAGGCTGCAGAAGAAAATGGTTTATTCAAGAACACCATTTTGAAGAGTCCAATTCCAACACTGTCGCCGTCGCCACCGCCGCCGCTGCCGCCGCAGCCACTTCTCTCTCAAAAATCTGTGTCATTCTCAAACCTCTTAGATGCCATGGACTACTCCATGCTCAGCACCATCTTATCTGAGAACAATAACAACAGCACCCTTGATCAGGAACAATACTCCCAGATCAACACCAACCAATTGAACCATTCATCGAACATGGAGAACACTAGTAACAGCAACATGATGCTGATGAGGTCAAAGCGCCAGATAGACGAGGAAACAACAACGGTGTTGCACCCATCAAAGAAGTTCCATCACCAACTTATGGGCTCTTCTTCTTGCAGCTTCCCTAATAACATTAACAACACAAACACTGCACAATACGAGAACCCGCAATGGAACTACCTTGTCAAGCAATCCTTCTTGAACCAGCACTTACTTCTCGCTCCTCATCTTCGATTTCAAGGATAA 1071 0.465 MGSPESNLPPGFRFHPTDEELILHYLRKKVASIPLPVSIIAEVDIYKLDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVVSPAATVTRRVGQESSVGVKKALVFYKGRPPKGVKTNWIMHEYRLVDNNRPIKLKDTSMRLDDWVLCRIYKKSKFSVSSPEESPSSEVQAAEENGLFKNTILKSPIPTLSPSPPPPLPPQPLLSQKSVSFSNLLDAMDYSMLSTILSENNNNSTLDQEQYSQINTNQLNHSSNMENTSNSNMMLMRSKRQIDEETTTVLHPSKKFHHQLMGSSSCSFPNNINNTNTAQYENPQWNYLVKQSFLNQHLLLAPHLRFQG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02553 356 ProSiteProfiles NAC domain profile. 8 171 IPR003441 GO:0003677|GO:0006355
Aip06g02553 356 SUPERFAMILY NAC domain 5 171 IPR036093 GO:0003677|GO:0006355
Aip06g02553 356 PANTHER OS01G0104200 PROTEIN 6 296 - -
Aip06g02553 356 PANTHER NAC TRANSCRIPTION FACTOR 56 6 296 - -
Aip06g02553 356 Pfam No apical meristem (NAM) protein 9 144 IPR003441 GO:0003677|GO:0006355
Aip06g02553 356 Gene3D NAC domain 17 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02553 Aip-Chr6 113065866 113067909 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02553 4 356 NAC Transcription Factor Family AT3G04070 48.767 8.91e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip06g02553 NAM 8.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02553 - - ahf:112754912 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02553 06 113065866 113067909 Aip06g02553 06 113065866 113067909 ECH