Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02543 ATGAGTGCAGGGCAACCAAAGCGCCACTTGGTTACAACTGAATGGAGTATATTTGTCAGTGGAAAGAGGCTCTTTGCTAGAGACTCTGTTTTATTTATACGGCTAGCTAACAGGCAACTAGCCAACATATCATCCTCGGTATTGTCAAGTGATAGTATGCATATTGGGATTCTTGCGGCAGCTGCTCATGCTTTTGCAAATAATAGTCCCTTTACCGTCTTTTACAATCCTAGGGATAGTCCTTCAGAGTTTGTTATTCCTTTAGCCAAGTACTACAAGTTTGTATATGCAAGCATGGCTTTATTGTCTAAGGCTGCAATTTCCAAAGGAATGACCCCTTTTGTTTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTTTCTTATCTTCATTTTCTTTTTTTGACAGTAAACAGAGTGCTCCCTTGTCAGGCAAGTTACTGTGCAATTTGTTTCTTATTTCACTTGTTGGGTTGACAACAAGTTCAACACTTTCCAAAATTTGGATCTGA 510 0.3902 MSAGQPKRHLVTTEWSIFVSGKRLFARDSVLFIRLANRQLANISSSVLSSDSMHIGILAAAAHAFANNSPFTVFYNPRDSPSEFVIPLAKYYKFVYASMALLSKAAISKGMTPFVFVVYRQAFASVFLSSFSFFDSKQSAPLSGKLLCNLFLISLVGLTTSSTLSKIWI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02543 169 Pfam Auxin response factor 61 99 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aip06g02543 169 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 4 100 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip06g02543 169 PANTHER AUXIN RESPONSE FACTOR 19 4 100 - -
Aip06g02543 169 SUPERFAMILY DNA-binding pseudobarrel domain 4 64 IPR015300 -
Aip06g02543 169 Gene3D - 1 44 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02543 Aip-Chr6 112666292 112668266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02543 4 96 B3 DNA Binding Superfamily AT1G30330 68.269 1.18e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02543 - - aip:107604936 175.252