Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02537 ATGGCTTCGGCGAACGTGAACGGAGTGGCGCCATTTCTGAGCAAGACGTACGACATGGTGGATGACTCGCCCACTAATTCGGTTGTTTCGTGGAGCGATAACAGCAATAGCTTCATCATCTGGAACGTTCCCGAATTCGCAAGCCGAATCTTGCCCAAATACTTCAAGATTAAAAAAAAAGAAGGCAGGGCCAAAGAAAAAATAATAATAAAAAAAGAAAAGAACAAGTCTTCTGTCTTCACTGGATGTCGTTGTCATGGGGTTGCGTCGCCGTCGCTGAAATCGGTTATCTGCGTCTTCATCGGAGTGCGGCGCCTGCTCCTCTCTCAAAAGTTTGAATCTTCATCGGAGGCACCACCTGAATATTCAATAGATTCAGGGACTAGGAACTTCGAAGATGGTTCCACACGTGTGAAGAGTTTTGATGACGAGAAGACTGGTTACTGGTTCAGTGCCGCCGAGGAGGATGAGGACGAGCAGGTGTTGCAAACGTGA 495 0.4747 MASANVNGVAPFLSKTYDMVDDSPTNSVVSWSDNSNSFIIWNVPEFASRILPKYFKIKKKEGRAKEKIIIKKEKNKSSVFTGCRCHGVASPSLKSVICVFIGVRRLLLSQKFESSSEAPPEYSIDSGTRNFEDGSTRVKSFDDEKTGYWFSAAEEDEDEQVLQT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02537 164 Gene3D - 4 62 IPR036388 -
Aip06g02537 164 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 2 56 - -
Aip06g02537 164 MobiDBLite consensus disorder prediction 117 136 - -
Aip06g02537 164 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 56 IPR027725 -
Aip06g02537 164 SUPERFAMILY "Winged helix" DNA-binding domain 8 59 IPR036390 -
Aip06g02537 164 PRINTS Heat shock factor (HSF) domain signature 12 35 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip06g02537 164 PRINTS Heat shock factor (HSF) domain signature 50 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip06g02537 164 MobiDBLite consensus disorder prediction 117 134 - -
Aip06g02537 164 Pfam HSF-type DNA-binding 12 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aip06g02537 164 SMART hsfneu3 8 141 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02537 Aip-Chr6 112396070 112396849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02537 2 56 HSF AT3G02990 63.636 1.16e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aip06g02537 HSF_DNA-bind 8.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02537 K09419 - ahf:112795326 248.825