Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02507 ATGCAAGATGGAACGTATGATATGGGAGTTGAGGTAGATGAAGCTCTTGTGCAGGTGGAGGGGATAGCGGGTGGATCCCCAAACCAGTTGATAGGGCTGGAAGGTATTACTGTAGACGATGTTCTTCAAATAAAATTCAGCACTTCTAAAGAAGGTTTTCCAGAGAAGAAATGGTTGGAAAAAATGGATCAGAAAATGGAGCATAAGGTAGTCACTCGTTGTGGGTGTCTCGCTGAGATGAGGATTAAGAGAAAAGATGGAAGCAAAAAATGGTACGTGTCGTGGTTCGTTGATGAACATAACCACGAGATGGTATCTGGAGAGATTGTAAATTATCTTAGGTCACATAGGAAGATATCGGAGGTCAAGATTGCTCAGCTGACTAGTATGAGGGGAATTGGGATTAGCATTATGAAGATATACGCATCCTTTGCAGCACAGCTTGGAGGTTTTAATAAGAGTGATGGTCGTAGTCAGAATGATTATGCTATTTTTGGAAATGTGCTTGCTTTTGATGCAACTTATGGACATAACAAATACAATCTACCGGTGGTGGTATTCTTAGGGGTTAATGATCACAACCAAACCTGTGTTTGCCATGGCAATGGCTTCATAAATGCAACACAGAATATATGTGATCCACATTTCACGCAATTGCTACGGCATTGTATGTCGGCAGACATGGAGACTGAAGAATTCGAAATGCACTGGCAGTCAATGGTCGACGAGTGTGGCATTTTTGATATAGAGTGGGTGAAGGACTTGTATAGAAAAAAGAATTCTAGTGCGACCGCCTACATACGAGGGAGGTTCTTTGCCGGTATAAGGACCACATCTCGTTGTGAGTCGTTACATGCTAAGCTTGGGAGGTTTGTTGAGAGACAGGTCGCATGCATGAGTGATGAGGACTTCAAGAAATACTCTAAGAAGTTTCTAAGTGATGCAGTTGTATTGAAAATTAAGTACGGCCTGAGACCCACTGAACCTATCGTGACAAGCGGGTTAGTCCGTCAAGGGATAAAGGACCCGGTCTATGTTAGAACGAAGGGCACCAAACAATATTCCCAGGCCTCTCTGTCAGTTGGGAAGAAGCAACAAAAGTGTAGCACATGTGGCCGACTTGCACATCGAAGGACGCAATGTCCCAATGCACCAAGCCAGGCTTCCTTACGGCCAATAGATGAGTCTGTGCTTAATAGGATGACTCAAGAAGTTCAGAATGGTGCTCCATGCCGCTGTACTATTCAGTATTCAAGTCAACCTTGTTTAGAACCTCGTTGA 1281 0.4364 MQDGTYDMGVEVDEALVQVEGIAGGSPNQLIGLEGITVDDVLQIKFSTSKEGFPEKKWLEKMDQKMEHKVVTRCGCLAEMRIKRKDGSKKWYVSWFVDEHNHEMVSGEIVNYLRSHRKISEVKIAQLTSMRGIGISIMKIYASFAAQLGGFNKSDGRSQNDYAIFGNVLAFDATYGHNKYNLPVVVFLGVNDHNQTCVCHGNGFINATQNICDPHFTQLLRHCMSADMETEEFEMHWQSMVDECGIFDIEWVKDLYRKKNSSATAYIRGRFFAGIRTTSRCESLHAKLGRFVERQVACMSDEDFKKYSKKFLSDAVVLKIKYGLRPTEPIVTSGLVRQGIKDPVYVRTKGTKQYSQASLSVGKKQQKCSTCGRLAHRRTQCPNAPSQASLRPIDESVLNRMTQEVQNGAPCRCTIQYSSQPCLEPR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02507 426 PANTHER OS02G0262500 PROTEIN 209 298 - -
Aip06g02507 426 PANTHER OS02G0262500 PROTEIN 55 140 - -
Aip06g02507 426 PANTHER OS02G0262500 PROTEIN 153 198 - -
Aip06g02507 426 Pfam FAR1 DNA-binding domain 41 105 IPR004330 -
Aip06g02507 426 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 153 198 IPR031052 GO:0006355
Aip06g02507 426 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 140 IPR031052 GO:0006355
Aip06g02507 426 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 209 298 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02507 Aip-Chr6 111763558 111768001 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02507 FAR1 4.8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02507 - - aip:107615119 312.383