Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02498 ATGCAACAGCTTCCACTAGGCCCGGCGTTCGACCTTGGTCGTGATCATGGCAAGCGGTTGACAGGAGCTCAGAACCATGACTGGGGAGAGATTTACAGTCATTTGGTTAACAGATGGAGATTTGACCGCTATAACACATTGCAGTTAGGCGAGGAGATTATTGACTTTCATTCTTTCCCAATGTACTACGAGCGGTACACACAGCAGTATGGGATGCACCTGCGACTGTCAGATAGAGTTGCAGGTGAAGAGTTTCAGGATCCGGCATATGCCCAGCAGTGGCTGGCATATCAGCAGCAGGCACCATATATACCGGAACCACAGTCTCCTCAGGCACCTGAGCCCTACATACCACAACTGTCTGGTGGTCATCGCGCCACTTCATGTCATGCCAGTGACTTCGACTTTGATCAATCGACAGGTCATGTAGATCCGCCCGGTCCTTCCGCACCACCACGCTCCCAGTTGTTTGATTTGAATGAGTACCCGCAGCAGGAAGAGGGAGATTTGGGATACAACTTGCAGCACTGGTATGATCTTGGTGGAGTGAGTGCTCCGACGATAAGTGGCTCCGGTTTGTATGACACTGGTGGTGCGAGCATGACAGATTTCAGTGGTCCTGACGTTGGCAGTCGGCTGGATGCCGTCAAGTGGAACCAAATTAGTACCGACTGGGACGCGGATAACAGGCAAGGCAAGAAATTAACGGCAAGGGTGAAAGCTAGGGTTTTGGATTTGGGAATGGAGAAGAAGGAATTGGACACCACCAACAACGCCAATGCTGCTCTTCACCCCCTCAAGAACAAATTCGTACTATGGTACACTCGTAGAACACCTGGAGTTCGAAACCACACCTCAGATTCGTACGAGGACAGCATCAAGAAAATTGTCCATTTCAGTACCGTTGAAGGATTTTGGGTGTGCTATTGCCATCTTTCTCGCCCTTCGTCCTTGCTAGTTCCCACTGATTTGCACCTTTTTAAGGAAGGAATCCGCCCTTTGTGGGAGGATTCTGCTAACTGCAATGGTGGTAAGTGGATTATTCGATTCAATAAGGTTGTCTCAGGCCGGTTTTGGGAAGACCTGGTTCTTGCCTTAGTGGGTGACCAACTAGATTATGGAGATGACATTTGTGGTGCAGTACTAAGCATTCGTTTCAACGAAGACATAGTGAGTGTCTGGAATCGCAATGCTTCCGATAATCAGGCTATAATGGGTCTGAGAGATTCAATAAAGCGTCATTTAAAGCTTCCCCATGGGTATGTTATGGAGTACAAGCCCCACGATGCCTCTCTGCGCGACAACTCCTCTTACAGAAACACTTGGTTGAGAGGCTAG 1338 0.4903 MQQLPLGPAFDLGRDHGKRLTGAQNHDWGEIYSHLVNRWRFDRYNTLQLGEEIIDFHSFPMYYERYTQQYGMHLRLSDRVAGEEFQDPAYAQQWLAYQQQAPYIPEPQSPQAPEPYIPQLSGGHRATSCHASDFDFDQSTGHVDPPGPSAPPRSQLFDLNEYPQQEEGDLGYNLQHWYDLGGVSAPTISGSGLYDTGGASMTDFSGPDVGSRLDAVKWNQISTDWDADNRQGKKLTARVKARVLDLGMEKKELDTTNNANAALHPLKNKFVLWYTRRTPGVRNHTSDSYEDSIKKIVHFSTVEGFWVCYCHLSRPSSLLVPTDLHLFKEGIRPLWEDSANCNGGKWIIRFNKVVSGRFWEDLVLALVGDQLDYGDDICGAVLSIRFNEDIVSVWNRNASDNQAIMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02498 445 Pfam Eukaryotic initiation factor 4E 265 425 IPR001040 GO:0003723|GO:0003743|GO:0006413
Aip06g02498 445 MobiDBLite consensus disorder prediction 121 156 - -
Aip06g02498 445 SUPERFAMILY eIF4e-like 260 441 IPR023398 -
Aip06g02498 445 Gene3D RNA Cap, Translation Initiation Factor Eif4e 245 437 IPR023398 -
Aip06g02498 445 PANTHER BNAA10G16710D PROTEIN 257 445 - -
Aip06g02498 445 ProSitePatterns Eukaryotic initiation factor 4E signature. 323 346 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Aip06g02498 445 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 257 445 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02498 Aip-Chr6 111299030 111304617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02498 264 445 Eukaryotic Initiation Factors Gene Family AT5G18110 82.967 4.20e-111 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02498 K03259 - gmx:100499744 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02498 06 111299030 111304617 Aip06g02498 06 111299030 111304617 ECH