Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02484 ATGTGCCGCGGCGCACTCGACGGAACTGGCGGTATGAGGTTCATAAACACGTGGGCCAAGCTCGCCAGAGGGGAACCTCTGGACGAATCTGATCAGTATCCTTGCCATGACCGTACGGAGCTGAACTCTCGGAAGATGAGTACGGGTTCGGAGTTCAGTGACCAGAATGGTCATGACCATTCTGAGTATGGAGCCCCGCCCCCATGGCTAGGTTCATTGGGAACCGAAGACGCTAAAGTCACCGTCGAAGTCATGAAGCTCACAGGGGAGCAAGTCAAGAAGCTCAAAATGAAAGCCACGTCTACCAACGGTAACGGTGAAATGACGAAACCCTTCTCGAGTTTCGAGGCCATTGCGGGGCATTTATGGAAGTCTGTTGTGGGGTTCGCGGCCGCCAAAGTGAAGGGGGCGATCGCCAAGGTGGATGACAAGTTCGTCAGATCCGCTCTTGAATACATTGATAATGTAAAAGACATGAACTTGATAAGGTACAATTTTCACTACCCTGCCAAGAGTGTTCATAAGGGACCTTCGAAAGGGAATCCGAACTTATTCGTAGTGAGTTGGATGAATTTCTCATATGAGCATGCTGATTTTGGTTGGGGTGTACCTTATTATTTTGGACCTGTGTATATGGATGCTGAGGGTAAAGCCTTTTGTCTCAACAAACCTAATGGTGATGGTATGGTACATGTGGCTATCTCTTTGGACTCGGCTCACATGCCTGCTTTCAAGAAAATCTTCTATGAGGACATATGA 759 0.4862 MCRGALDGTGGMRFINTWAKLARGEPLDESDQYPCHDRTELNSRKMSTGSEFSDQNGHDHSEYGAPPPWLGSLGTEDAKVTVEVMKLTGEQVKKLKMKATSTNGNGEMTKPFSSFEAIAGHLWKSVVGFAAAKVKGAIAKVDDKFVRSALEYIDNVKDMNLIRYNFHYPAKSVHKGPSKGNPNLFVVSWMNFSYEHADFGWGVPYYFGPVYMDAEGKAFCLNKPNGDGMVHVAISLDSAHMPAFKKIFYEDI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02484 252 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 128 252 - -
Aip06g02484 252 Pfam Transferase family 129 250 - -
Aip06g02484 252 Pfam Transferase family 6 127 - -
Aip06g02484 252 MobiDBLite consensus disorder prediction 26 70 - -
Aip06g02484 252 MobiDBLite consensus disorder prediction 26 44 - -
Aip06g02484 252 Gene3D - 1 63 IPR023213 -
Aip06g02484 252 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 1 126 - -
Aip06g02484 252 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 128 252 - -
Aip06g02484 252 Gene3D - 129 251 IPR023213 -
Aip06g02484 252 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 126 - -
Aip06g02484 252 Gene3D - 71 128 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02484 Aip-Chr6 110887249 110888007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02484 1 250 Monolignol Biosynthesis Gene Families AT5G48930 29.085 6.89e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02484 K13065 - gmx:100775549 256.914