Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02451 ATGCCATCTTCATTTTACAAAACACTCCATCCTTCATCCACGCCGCTTCTCACCGATTCGCTCCTAATCCTTCATCATCGGCGCCTTTCGCCCCTTCACCGCCGTTCCCAAAGCTCCATCACACCCCTTCCCCAATCTCTCTCTTTCAGTTTCGATGCTGATGAATTTCGCTACCTTCTTCACGCCGTTTTCTGTCGCTGCTCGCTAAAGCTCGTCAGCGTCGTCGCCGCCGCTTCTACCTCTTCTTCTCGTCACCGTTGGTTCAGTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGAAAAATCCTGATAAGGAAGAAGCTGAGAAAATTACACAACCATATTTAGATGCTCTTGGTGAAGACTATTCTGTTTGTTGCCTAGGAACTGCTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTAGTTCTAATGCCAAAGCCTTCAAGAGAGACGAGGATAGGGATGGCCAAGCAACCATAATCGCAGTAAGGCCGATTCGAAAAGGAAAAGAGCAACTGAGACAAGATACCTGA 561 0.4635 MPSSFYKTLHPSSTPLLTDSLLILHHRRLSPLHRRSQSSITPLPQSLSFSFDADEFRYLLHAVFCRCSLKLVSVVAAASTSSSRHRWFSDLVVASPVEDYFLYIDDLKNPDKEEAEKITQPYLDALGEDYSVCCLGTAFFPLQSCMNHSCSSNAKAFKRDEDRDGQATIIAVRPIRKGKEQLRQDT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02451 186 Gene3D SET domain 97 182 IPR046341 -
Aip06g02451 186 Pfam SET domain 91 180 IPR001214 GO:0005515
Aip06g02451 186 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 90 180 IPR044237 GO:0008168
Aip06g02451 186 SUPERFAMILY SET domain 117 180 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02451 Aip-Chr6 109836189 109837881 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip06g02451 SET 5.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02451 - - aip:107628408 290.426