Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02432 ATGGCGCCGAAGCAGAGAGCAGCAAGGAAGGTTGGCAGGAACCCTGAACTGGTGCGGGGGATCGGGAAGTACTCTCGGTCTCAGATGTACCACAAGAGGGGTTTGTGGGCCATAAAGGCTAAGAACGGTGGCAAGTTCCCCATTATTGATCCAATTGATCTTATATGTTTCATTTTTTTTTGTCACGTTTTCAGGGCTAGCATTACTCCTGGGACAGTGCTGATTCTTCTTGCTGGAAGATTCAAGGGGAAGAGAGTTGTGTTCCTCAAGCAGCTTCCTTCTGGGCTGCTTCTTGTTTCTGGACCCTTCAAGATTAATGGAGTTCCGTTGAGACGTGTGAATCAGTCGTATGTTATTGCCACATCAACCAAAGTAGATGTGTCTGCTTGTAACGTGGAGAAATTCGATGACAAATACTTTTCAAAGGAAGTCCAGAAAAAGAAAAAGAAGGGAGAAGGCGAGTTCTTTGAGTCCGAGAAAGAGGAGAAGAAGACCCTCCCTCAAGACAAGAAGGATGACCAGAAGACTGTTGATTCTGCTTTGATAAAAGCCATAGAGAGTGTTCCAGACTTGAAGTTTTACCTTGGTGCTAGGTTTTCTTTGAAGCAAGGCCAGAAGCCTCATGAATTAGTCTTCTAG 639 0.4523 MAPKQRAARKVGRNPELVRGIGKYSRSQMYHKRGLWAIKAKNGGKFPIIDPIDLICFIFFCHVFRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIATSTKVDVSACNVEKFDDKYFSKEVQKKKKKGEGEFFESEKEEKKTLPQDKKDDQKTVDSALIKAIESVPDLKFYLGARFSLKQGQKPHELVF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02432 212 MobiDBLite consensus disorder prediction 155 175 - -
Aip06g02432 212 Pfam Ribosomal protein L6, N-terminal domain 5 41 IPR005568 GO:0003735|GO:0005840|GO:0006412
Aip06g02432 212 Gene3D - 66 150 IPR014722 -
Aip06g02432 212 PANTHER 60S RIBOSOMAL PROTEIN L6 64 212 - -
Aip06g02432 212 ProSitePatterns Ribosomal protein L6e signature. 106 124 IPR000915 GO:0003735|GO:0005840|GO:0006412
Aip06g02432 212 SUPERFAMILY Translation proteins SH3-like domain 66 156 IPR008991 -
Aip06g02432 212 CDD KOW_RPL6 65 212 IPR041997 -
Aip06g02432 212 PANTHER 60S RIBOSOMAL PROTEIN L6 1 51 - -
Aip06g02432 212 Pfam Ribosomal protein L6e 105 212 IPR000915 GO:0003735|GO:0005840|GO:0006412
Aip06g02432 212 PANTHER 60S RIBOSOMAL PROTEIN L6 1 51 IPR000915 GO:0003735|GO:0005840|GO:0006412
Aip06g02432 212 PANTHER 60S RIBOSOMAL PROTEIN L6 64 212 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02432 Aip-Chr6 109546990 109548415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02432 1 212 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 69.231 4.76e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02432 K02934 - pvy:116113922 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02432 06 109546990 109548415 Aip06g02432 06 109546990 109548415 ECH