Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02427 ATGGAATCTGTAAAGCTTGCTGATTTTGAATTGGCAAAGGCAACCAAATTGAACAACATTAAATCATGCAGGGGGACATTATTGTGGATGGTTCCTGAGGCTGTGAAAAGAAAGAACCAAGGTTATGGGCTTCTAGCTGATATGTGGAGTTTGGAATGCACTGTACTGAAAATGTTAACAGGCAAACTTCCATATTTAGAGTTTGAAAGTATGCAGGCATTATATAGAATTGGAAAAGATGAGTGTCCTTCTATGCCTGATTCTCTTTCAATGGGTGCCAGAAAAAGGCTTATGCTTCGGTGGGGTTTTTATGTGATTGCTAATATTCATCATGGCTATTTTCTAATGCAACATGTATGCTTCTGCCTCAATATTCATGGTGATGAGGAGGAGGATCAAAAGCATGATGATATTGATTCCATGGATGAAGATGATGAAGCTACTCAAGAAGATTCTGTTGAATGGTAG 468 0.3846 MESVKLADFELAKATKLNNIKSCRGTLLWMVPEAVKRKNQGYGLLADMWSLECTVLKMLTGKLPYLEFESMQALYRIGKDECPSMPDSLSMGARKRLMLRWGFYVIANIHHGYFLMQHVCFCLNIHGDEEEDQKHDDIDSMDEDDEATQEDSVEW 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02427 155 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 3 95 - -
Aip06g02427 155 SUPERFAMILY Protein kinase-like (PK-like) 4 94 IPR011009 -
Aip06g02427 155 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02427 155 MobiDBLite consensus disorder prediction 134 155 - -
Aip06g02427 155 Pfam Protein kinase domain 3 72 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02427 155 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 3 95 - -
Aip06g02427 155 MobiDBLite consensus disorder prediction 132 155 - -
Aip06g02427 155 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02427 Aip-Chr6 109483674 109485200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02427 3 94 MAP Kinase Kinase Kinase AT4G08500 58.065 1.92e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip06g02427 Pkinase 3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02427 - K13414 aip:107647255 297.745