Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02426 ATGATGGATGAACAGAATGAATTCGACCAAGATTTCAGAGATGAATTTACTGAGGGAGCGTATTTTTCTGAATCTGATCCGTCAGAAGATACCCTTGAAGCTGCTTATGTGGTTGACTCCTTCCAAGACATTACAACTTTGAATTTCAGTGAAAATTGTGTAGAAGAAATTGGTAAATATCACTTTTCTACTTTGCAGCTTGCATTTCATTTTTATCTGAAGAACTCAAAACAAGGATTTAGGGAGGAGAAGTATTACACGATGAAAAAAAGGAAGAAAGAGCCTAGATTGGAAATAAGAACTGGATATGAAGCCCGAATGGATGTTAAATTTGTACCTGAAACTCGAAGGTGGCATATCTTTTATTTCTCTAACGAACACAACTATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATTTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCCGGGATTAGCACTTCACAGATATTTGGTCTTCCAGCTAGTCAAGCAGGCGGGTATAAATTTGTCGGCTATGGTCCCAGAGATATGTACAATGAAATTGCTCGGCAAAGGCGTCAAGTTCCTGGTGATGCAGCACAGGTGTTGAAGAAGTTGGAGGATATGCAGTTGAAGGATCCACAATTATATTTCAATGCATGTTATGATTCAAGAGATTTGTTACGTAACTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCAACTCTTTGGGGACGTTATTGCTTTTGATGCTACGTATAAAAAGAACAAGTATAGTTGTCCATTAGTCATATTCAGCGAGGTTAACCACCACAACCAAACAATTGTTTTTGCTGCTGCCCTAATTGTGGACGAAACTACTGATACATATATTTGGCTCCTTCGTCAGCTCATGTTTGTAATGAAGGGTAAGACCCCAACCTCAATAATAATTTATGGGGCCATGGCGATTAGTAATGCGATAAGAGATGTATTTCCCGAAGTCAGACATAGATTATGCACTTGGTACCTTATTCGAAATGCGACTAGCAATGTTGGAAATCCATCGTTTACATCTAAATTCAGGAAAATCATGTTGGGAGACTACGAGATTCCCGTGTTTAAGCGTAAGTTTTTTGCTGGCTTTAGAACTACCTCAAGATGTGAAGGTCTACACTCAGTTGTGGTAAGGTATGTGGGGTCGCGGTATGATTTGACAAGTTTTGTAGAGCATTTTCAAAGGTGTGTTGCACACTTGCGCTTTAAAGAATTTAATGCTAATTATGAATCTACACCTGGGGTGCCCGTCATGCAGACCTGTATAGAGCTGCTAGAGAGATTTGCTGCTGAGGCATACACTCATGAGACATTTCTATTGTTTCGGCCATTTCTTTCTAGAGCTGGATCAATGCAGGTGCTAAACATAGAGAATAATGATAATTGCTCGAAGTACATTGTGTATAAGCATGGGAGGCCCGATTTTTTGTGGACCCTTGAATTTCGTCAAGAAGAAATGATTTTCATGTGTTCTTGTTTAAGAATGAAGTCATTTGGAATTCCTTGCGAACATATTGTGAAATTTCTAGTTCACAGAGACATTTGTGTGATTCACCGATCATTAGTGTTTGATTGA 1629 0.3898 MMDEQNEFDQDFRDEFTEGAYFSESDPSEDTLEAAYVVDSFQDITTLNFSENCVEEIGKYHFSTLQLAFHFYLKNSKQGFREEKYYTMKKRKKEPRLEIRTGYEARMDVKFVPETRRWHIFYFSNEHNYDLLDTQFSAMLPAHRKISEADIMQMMNMLKSGISTSQIFGLPASQAGGYKFVGYGPRDMYNEIARQRRQVPGDAAQVLKKLEDMQLKDPQLYFNACYDSRDLLRNLFWSDGISQLDYQLFGDVIAFDATYKKNKYSCPLVIFSEVNHHNQTIVFAAALIVDETTDTYIWLLRQLMFVMKGKTPTSIIIYGAMAISNAIRDVFPEVRHRLCTWYLIRNATSNVGNPSFTSKFRKIMLGDYEIPVFKRKFFAGFRTTSRCEGLHSVVVRYVGSRYDLTSFVEHFQRCVAHLRFKEFNANYESTPGVPVMQTCIELLERFAAEAYTHETFLLFRPFLSRAGSMQVLNIENNDNCSKYIVYKHGRPDFLWTLEFRQEEMIFMCSCLRMKSFGIPCEHIVKFLVHRDICVIHRSLVFD 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02426 542 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 80 378 IPR031052 GO:0006355
Aip06g02426 542 ProSiteProfiles Zinc finger SWIM-type profile. 493 531 IPR007527 GO:0008270
Aip06g02426 542 Pfam MULE transposase domain 252 346 IPR018289 -
Aip06g02426 542 PANTHER OS02G0262500 PROTEIN 80 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02426 Aip-Chr6 109479925 109481739 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02426 MULE 5.4e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02426 - - aip:107607175 922.154