Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02424 ATGGTCATATTGGAATCGCATTTCTTCCTCTTCCGTTGTTTTCTCCTCCTAGCTTCTGCCGCATGTTCTCTTTCCCACCCTTCTCTCCTCGATGTTCACCCTCTAGATGAGAAACATTACAGCTCCGAGGTAATCAAGTGCAAGGATGGATCAAAATCCTTCTCCAAAGATCGTCTCAATGATAATTTCTGCGATCGCCCTGATGGCACTGATGAACCAGGAACTTCAGCTTTCTCCGCCGGAAAATTTTATTGCAGAAACCTGGGAAGCAAGCCACAATTTATATTCTCTTCTTATGTTAATGATCTTTTCTGTGATTGTTGTGATGGGAGTGATGAATATGATGGATACATTCGGTGCCTCAACACTTGTGTAATGGGTGGGAATGCCAAAATTGGCAATTACAATTCAAAACTGAGTCAGCAGGCTTCTTTTGCTGGAAAAGTGACCAAAGATGAAGTGAAGTACGAGGACTTGGTTCATAATCTTATGAGTTTAAGGTTAGCAATTATTCTACAAGTGGTTCTGCTTGCTTTTATCGTATTTCTATGGCATTTTGGTTGCCGTTCCAGATCTAAAAGGAGGCGTACAATTATTAAGAGTTCAATTTTCAGTGGAAGATATGCTGACTTTGCAAGGCAATTAACATCACGCAGCTTTGGTGTCTATGCAATGGACTGGATAGGTCATGGAGGGAGTGATGGATTGCATGGGTATGTACCATCTCTTGATCATGTGGTTGCAGATGTAGTGGATACCTTTTTTAATTATGATAATTTATCAAAGGGAATCGTCTTTACTACAGATCGGCCGTATCAACCAGTTGAGTTGTCAGTGTCACTCAAAAAATCTGATCAATCCTACAAGGAGAAATTAGAACTCTTGAAGAAATATGGATTATCAGGATCTCAATGTTTTCCAATACAGATTACTGGTTGGCCATTGGAGTTAATGGCTTATGCTTATTTAGCTATGGCTGCAGCAGCATCAAATAAAAGTATCGCCAAGAAAGATTCGAGATATCCTGAAATAGAGGAGCAGGCATTGTGCGAATCCAGTATATTAAAATATAACAATTTCTTACAGGCAAGAAACCTTTTGATGCCTTCATCTCTTACTTTTAGAACGGATCATAGCTTTTGA 1143 0.3963 MVILESHFFLFRCFLLLASAACSLSHPSLLDVHPLDEKHYSSEVIKCKDGSKSFSKDRLNDNFCDRPDGTDEPGTSAFSAGKFYCRNLGSKPQFIFSSYVNDLFCDCCDGSDEYDGYIRCLNTCVMGGNAKIGNYNSKLSQQASFAGKVTKDEVKYEDLVHNLMSLRLAIILQVVLLAFIVFLWHFGCRSRSKRRRTIIKSSIFSGRYADFARQLTSRSFGVYAMDWIGHGGSDGLHGYVPSLDHVVADVVDTFFNYDNLSKGIVFTTDRPYQPVELSVSLKKSDQSYKEKLELLKKYGLSGSQCFPIQITGWPLELMAYAYLAMAAAASNKSIAKKDSRYPEIEEQALCESSILKYNNFLQARNLLMPSSLTFRTDHSF 380
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02424 380 Pfam Glucosidase II beta subunit-like 26 126 IPR028146 -
Aip06g02424 380 Pfam Rubisco LSMT substrate-binding 283 340 IPR015353 -
Aip06g02424 380 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 13 196 IPR039794 -
Aip06g02424 380 Gene3D alpha/beta hydrolase 181 257 IPR029058 -
Aip06g02424 380 SUPERFAMILY alpha/beta-Hydrolases 206 252 IPR029058 -
Aip06g02424 380 PANTHER EXPRESSED PROTEIN 13 196 - -
Aip06g02424 380 Gene3D - 269 377 IPR036464 -
Aip06g02424 380 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 279 358 IPR036464 -
Aip06g02424 380 Pfam Serine aminopeptidase, S33 205 252 IPR022742 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip06g02424 Aip-Chr6 109242737 109247554 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02424 20 139 Calmodulin-binding Proteins AT5G56360 57.851 1.22e-38 144
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02424 - - aip:107647257 378.637