Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02401 ATGAATGAGCAATACCAGGAGGAGGATGACATTAACCAACAAGAAGAGCAAGTTTGTGACCAAGATACGATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAAGTTACTGAGGGAGCGTATTTTTCTGATTCTGATCAGTCAGAAGATATCCTTGAAGCTGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAACTTTAGTGAAAATTTTGTGGAGGAAATTGGCAAATATCACTTTTCTACTTTGCAGCTTGCATTTTATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTATTGGCGAGATTTATAAACAAAAGTTTGTATGTCATAGGCAAGAATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTCGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAACTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGGAAAATATCATAG 594 0.3855 MNEQYQEEDDINQQEEQVCDQDTMDEQNEFEQDFRDEVTEGAYFSDSDQSEDILEAAYAVDSVQDITTLNFSENFVEEIGKYHFSTLQLAFYFYLKYSKSKGFSARKSKTFKNSIGEIYKQKFVCHRQEFREEKYYTMEKRKKEPRLETRTGCEARMDVKFVPETGRWHIFYFSDEHNHDLLDTQFSAMLPAHRKIS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02401 197 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 193 - -
Aip06g02401 197 MobiDBLite consensus disorder prediction 1 23 - -
Aip06g02401 197 Pfam FAR1 DNA-binding domain 93 182 IPR004330 -
Aip06g02401 197 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 24 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02401 Aip-Chr6 108666221 108666814 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02401 FAR1 5.3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02401 - - aip:107607217 355.91