Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02397 ATGCACACAAATTCTCTTGTTATGCTGAGCTTCGATGGCCTTAAGCAGGCTGTTGTTGGGATTAAGAGACTGTGGAAAGGTGTTCTCATGTTTGGGCCTCCCGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCTGCAACTTTAGCTTCCAAATGGCGTGGTGAGAGTGAACGCATGGTGCGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCGGATTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCACTGAGGCGAGGGCTGGAAAAGCGTATATACATTCCTCTTCCGAATTTTGAGAGTCGTAAAGAGTTGTTGCGTATCAATTTGAAGACTGTGGAGGCAAGTTAG 558 0.4409 MHTNSLVMLSFDGLKQAVVGIKRLWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVRIDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRGLEKRIYIPLPNFESRKELLRINLKTVEAS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02397 185 Pfam ATPase family associated with various cellular activities (AAA) 28 165 IPR003959 GO:0005524|GO:0016887
Aip06g02397 185 Gene3D - 16 165 IPR027417 -
Aip06g02397 185 CDD AAA 11 165 - -
Aip06g02397 185 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 19 184 - -
Aip06g02397 185 SMART AAA_5 24 167 IPR003593 -
Aip06g02397 185 PANTHER AAA DOMAIN-CONTAINING 19 184 - -
Aip06g02397 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 180 IPR027417 -
Aip06g02397 185 ProSitePatterns AAA-protein family signature. 137 155 IPR003960 GO:0005524|GO:0016887
Aip06g02397 185 Gene3D - 166 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02397 Aip-Chr6 108645807 108646763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02397 23 185 Calmodulin-binding Proteins AT3G56690 46.988 6.70e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02397 K07767 - egr:104423135 319.316