Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02383 ATGCAACGGGGAGAGAGGAAGATGGATCCTCGACCGATCACACGGCGCGGGTGTGAAGCTCGGATTAAGGTTCACGTTAATGATACTAATAGGCGATGGTTTGTTGAACAATTCTGTGATAACCATAATCATCCCATGCTGGATGTGAGGTTTAGGGGTCTGATGCGGTCACACAGAGCAGTCAAGGAAGGTGATTTGCACAAAATCAATTCGATGAGGAAAGCTGGGTTGCGAGTGTTGACGATATTCTGTGCCTTTGCCAATCAGACTACCGATTGTGGAATGTTCTGGAAGTACTCTCTCGATGGTGAGAAGAGGCTGGAAAATCTCTTCTGGTGCGATGATACTAGTCGTTATGATTACAGTGTGTTCGGGGATGTCCTGGGATTTGACGCAATGTACGATCGTAATAAATACAAGTGCTCGTTGGTAATATTCTCAGGGGTGGACCATCATATGAGGACGGTTGTGTTTGGTTGCGCCATCTTGAGCAACGAGAGTGAACAAAGCTATGTGTGGTTGTTGCGGACTGAAGACAACGTCAAGGCTTTGAATATGCAGATTGAAAAATTTATACACAACGCATATAATCTAAGGGAGTTTGTGGAGCACTTCCAACACTACCTGGAATTCATGAGAATAAGAGAATTGGTGACAGACTATAGGTCTGCATATGGCGAACCTGTAGTAAAAACAAAACTTGAAGCCATTGAGCAGTTCGCAGGCCAAAGCGACGGTTTATACAAGAGAGGTTTTCGAACTGTTTTGGGAGGTGCTGATGCTAGCCAGCAATGTGAGAGTTGTGTCCACCAAGAGGACGAGTGCTTGTGTTTTGTTTGGGAATGCAATGTATTTCAAGTAGAGATCATGGGTTGTGTCATAGGAAGTCTCATACTTGATTGGTGGACAAAAAGGGCAAAGCAGCCGAGTGCGACAAGTGACGGAGTACGTGTTGGCAAGATTCCAGACACAACATACATCAGCATGCACGCGGCGATGCTGGACAATTACAGGGAGCTGGTAAACTTGTCTTGCCGGTTCTTCGATGACTACTTGAACATGAAAACAAGGTTGGCAAGGGAGCACCAATTCCTGTGGGACAAACACCGCCAAAGGCTAGGGGTTGCTGAAGAAAGGTACCGGGTGTGTGGAAAAGCTGAACACAATTCTCGCAAGTGTCACAAATCATGTACGGGGGAGAACATCGGTAGTTGCGAAGCAGCGGTGGCTTACGAGAGCATGGTAGCAGGAGAGGGAGGTGAGGACTACTTTGATTTTGAGTGA 1284 0.465 MQRGERKMDPRPITRRGCEARIKVHVNDTNRRWFVEQFCDNHNHPMLDVRFRGLMRSHRAVKEGDLHKINSMRKAGLRVLTIFCAFANQTTDCGMFWKYSLDGEKRLENLFWCDDTSRYDYSVFGDVLGFDAMYDRNKYKCSLVIFSGVDHHMRTVVFGCAILSNESEQSYVWLLRTEDNVKALNMQIEKFIHNAYNLREFVEHFQHYLEFMRIRELVTDYRSAYGEPVVKTKLEAIEQFAGQSDGLYKRGFRTVLGGADASQQCESCVHQEDECLCFVWECNVFQVEIMGCVIGSLILDWWTKRAKQPSATSDGVRVGKIPDTTYISMHAAMLDNYRELVNLSCRFFDDYLNMKTRLAREHQFLWDKHRQRLGVAEERYRVCGKAEHNSRKCHKSCTGENIGSCEAAVAYESMVAGEGGEDYFDFE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02383 427 PANTHER OS02G0262500 PROTEIN 87 177 - -
Aip06g02383 427 PANTHER OS02G0262500 PROTEIN 6 80 - -
Aip06g02383 427 Pfam FAR1 DNA-binding domain 5 47 IPR004330 -
Aip06g02383 427 Pfam MULE transposase domain 127 181 IPR018289 -
Aip06g02383 427 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 80 IPR031052 GO:0006355
Aip06g02383 427 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 177 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02383 Aip-Chr6 108556356 108558305 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02383 MULE 8.1e-11 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02383 - - adu:107488784 279.256