Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02378 ATGGCAAATAGAACTCATCATCCTTCAGTGTTTCTGGTTGTGATTACAATTTTACTTTCCATCTATCAATCCGAGCAACGGCAATCACAGCAATCTCTGATCCTCTTAAGAATTCAACAGATATTGAACTTTCCTGTTGAATCAAGCAATTGGAACAATAATTACTTAGATTTTTGCAAGGGAGATTCAAATTCTTCTTCTCTCACTGTTGTATGCTATGAAGGAAACATAACACAGCTTCATATAATTGGTGACAGAACTTCACCACTTGCCAAGAATTTCTCAATGGACTCCTTAGTCAAAACCTTGACAAGGCTTCCAAGTTTGAAGGTCCTCACACTGGCCTCTCTGGGTTTGTGGGGTTCCTTGCCTGACAAGATTGCGCGGCTGCAGTCGTTGGAAATCGTTAATGTTAGTTCCAATTTTCTTTATGGTGCCCTGCCTCGAGAGGTTTCATCGCTGTCGAATCTCCAAACACTCATTCTTGATAACAATTTGTTTTCCGGCCGGCTTCCAAATTGGCTTGACTCACTTTCAACCTTAAGAGTGTTAAGTTTGAAGAACAATGTATTCAATGGATCGCTTCCAAATTCTCTTGGTAGCTTGGAGAATTTGAGGATTCTTTCACTTTCGCATAACCACTTTTTCGGGCTAGTACCTGATTTGAGCCAATTGACAAATCTTCAGGTGTTGGAACTGGATGATAATGCTTTTGGACAGCAGTTTCCTCGGCTTGGTAACAAATTGGTTACTTTAGTCCTAAGGAACAATAGTTTCAGGTCTGGAATCCCTGCTGGATTAAGCTCATATTTTCAGCTTGAACAATTTGATATTTCATCAAACAGATTCGTGGGGCCATTCCAGCCATCATTGCTGTCTCTTCCTTCCATTACCTATCTGAACATTTCTGGAAACAGATTAACAGGGAAGCTTTTTGAGAATCTGTCTTGCAATACTCAACTTGATGTGGTGGATTTGTCTTCGAATCTTTTGACAGGTAGCATACCGAAATGCTTGATCTCGAATTCCAGTAATAGGACTATACTATATGCTAGAAATTGTTTAGAAACAAGGAATCAGATTCAGCAGCCGGCGCCATTTTGCCACACGGAAGCTTTAGCCGTTGGGATATTACCTGACATAAAAAAGAAGCACAAAGAAAAAGTTTCTAAGGTAGTTATCTCCCTTGGCATAGTAGGTGGAACTCTTGCAGGAGTAGCACTTGCTTTGTTGATTTTCTTTCTTGTTAGAAGAGGAAATTCTAGAAGAAGAATGAAGAATCCTCCAACAAGGTTTATATCAGAAAATGCAGCTTCTGGATACACCTCTAAGTTGCTCTCTGAAGCAAGATATATATCGCAAACAAAGAAGTTTGGCACGGTAGGCCTGCCAAGTTATCGAAGTTTTTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTCGACACGGCTTCTTTAGTGAGTGAAGATTCTTATGGCAAGATGTACAGAGGTCAGCTGAAGAACGATTTGCTCGTCGCCATAAGATGCATAAAACTGAAAAAGAGGTACAGCACGCAGAACTTCGCACACCACATAGAGTTGATATCGAAACTTAGGCACCGGCATCTAGTCAGTGCTCTTGGACACTGCTTTGAATGTTCTCTAGAAGATTCAAGTGTCAGCAAAATATTTCTTGTCTTTGAATACATACCGAATGGCACACTCAGAAGCTGGATATCTGATGGTGACACAATGAAATCAATGAGTTGGATCCAGCGCTTAGGAGCCGTGACCGGAATAGCAAAGGGAGTTCAATTTTTGCATACAGGGATTGTCCCCGGTGTATATTCGAACAATATCAACGCTGAAGATGTTCTACTGGATCAGAATCTTGTTGCGAAAATCTGCAGTTATAACCTGCCTTTGTTATCTAACATAGGAAAGATTCAGCATGGAAGTTCTTCTAGCGGATCGAAAAATTCTAGCATGAAAAAAAGTGTAAATCATGAAGATAAGTCTGATATATATGACCTTGGAGTTATTCTACTGGAACTTATTCTTGGAAGGGCAATAAAATTAAGCAAGGATGCAGATGCTTTTAAGGAACTGTTACAAGCAACCATAGTGGCTGACGAGGAAGCTCGAAGAAGCATCATCGATCCTGCAATTCGCAAGGAATGCCTGGATCAATCATTGAAGACAATGATGGAGATCTGCGTGCGGTGCCTCGCTAAAGAACCGGCAGAGAGGCCATCCATAGAAGATGTGTTGTGGAACTTGCAATTTGCAGCTCAGGTACAAGATGCATGGAGAGGAGACTCTCAAAGCAGTGAGGGAGGCTCACCACCTGCCTTATCACCTCTTCAATCTAGAAGAGTTTCCTTCCATTAG 2373 0.4117 MANRTHHPSVFLVVITILLSIYQSEQRQSQQSLILLRIQQILNFPVESSNWNNNYLDFCKGDSNSSSLTVVCYEGNITQLHIIGDRTSPLAKNFSMDSLVKTLTRLPSLKVLTLASLGLWGSLPDKIARLQSLEIVNVSSNFLYGALPREVSSLSNLQTLILDNNLFSGRLPNWLDSLSTLRVLSLKNNVFNGSLPNSLGSLENLRILSLSHNHFFGLVPDLSQLTNLQVLELDDNAFGQQFPRLGNKLVTLVLRNNSFRSGIPAGLSSYFQLEQFDISSNRFVGPFQPSLLSLPSITYLNISGNRLTGKLFENLSCNTQLDVVDLSSNLLTGSIPKCLISNSSNRTILYARNCLETRNQIQQPAPFCHTEALAVGILPDIKKKHKEKVSKVVISLGIVGGTLAGVALALLIFFLVRRGNSRRRMKNPPTRFISENAASGYTSKLLSEARYISQTKKFGTVGLPSYRSFSLEEIEAATNYFDTASLVSEDSYGKMYRGQLKNDLLVAIRCIKLKKRYSTQNFAHHIELISKLRHRHLVSALGHCFECSLEDSSVSKIFLVFEYIPNGTLRSWISDGDTMKSMSWIQRLGAVTGIAKGVQFLHTGIVPGVYSNNINAEDVLLDQNLVAKICSYNLPLLSNIGKIQHGSSSSGSKNSSMKKSVNHEDKSDIYDLGVILLELILGRAIKLSKDADAFKELLQATIVADEEARRSIIDPAIRKECLDQSLKTMMEICVRCLAKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSEGGSPPALSPLQSRRVSFH 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02378 790 Pfam Leucine rich repeat 155 215 IPR001611 GO:0005515
Aip06g02378 790 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 776 - -
Aip06g02378 790 Gene3D Ribonuclease Inhibitor 28 243 IPR032675 -
Aip06g02378 790 Pfam Protein tyrosine and serine/threonine kinase 488 751 IPR001245 GO:0004672|GO:0006468
Aip06g02378 790 Gene3D Phosphorylase Kinase; domain 1 452 563 - -
Aip06g02378 790 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Aip06g02378 790 SUPERFAMILY L domain-like 52 355 - -
Aip06g02378 790 Gene3D Transferase(Phosphotransferase) domain 1 564 771 - -
Aip06g02378 790 SUPERFAMILY Protein kinase-like (PK-like) 462 756 IPR011009 -
Aip06g02378 790 MobiDBLite consensus disorder prediction 765 790 - -
Aip06g02378 790 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 776 - -
Aip06g02378 790 Gene3D Ribonuclease Inhibitor 244 368 IPR032675 -
Aip06g02378 790 ProSiteProfiles Protein kinase domain profile. 481 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02378 Aip-Chr6 107872482 107877400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02378 44 782 Miscellaneous Gene Families AT3G03770 60.000 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aip06g02378 PK_Tyr_Ser-Thr 2.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02378 - - gmx:100807539 1157.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02378 06 107872482 107877400 Aip06g02378 06 107872482 107877400 ECH