Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02377 ATGTCTGAGCCACAAGGTGTTGCTGATCATGGCACCAATTCAGGAACACGGCGAAAAGGTGCGGCCACAAAGCGTGCCATGGCAGTGGCAGCAGCAGCAACGGTGCCTCCATGTGGGGCATGCAAGTTCTTGAGGAGGAAGTGCATCAGCGGCTGCATCTTTGCGCCCCATTTTGGCTCCGACCAAGGCGCCGCTCGCTTCGCGGCCGTGCACAAGGTGTTTGGTGCAAGCAACGTGTCGAAACTGTTGTTGCATATTCCGGTGAACCGCCGCCATGAGGCGGTGGTTACCATATCCTATGAGGCACAGGCAAGGCTGTCTGACCCGGTGTATGGTTGTGTGTCCACCATTCTTGCTTTGCAACAGCAGACTCATTTTCAGGTGGCATCATTGCAAGGGGAGCTTTCTATGGTGCAAAATCAGCTGATAAATTCTAGGTTTGCATATGCAAATGTTCTTCATCAGTGCACACAACAGCATCATCATCATCATCATCGTGATAATAATCAGCCAAACATGATCAATGTATCTTTATTACAACAACCAACATACTCCAACAATAATTCATCTGCTTCAACCAATAATAACCTTGTGAACATGAACACCTTCAATAATAATAATAATAACCATTCAGGTTTCGAGCTTGCAATGGAGGCGGCACCATCATCACCGCCACACAGCTTTGAGCCTCTTCGGTTGTCACAGGAAAATAATGACGAGGATGATGAGGAAGAGAGCATCATTATTCCACAACTATTCAACCATGAGATAGTGCTTCACCGTCAATGA 789 0.4753 MSEPQGVADHGTNSGTRRKGAATKRAMAVAAAATVPPCGACKFLRRKCISGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQTHFQVASLQGELSMVQNQLINSRFAYANVLHQCTQQHHHHHHRDNNQPNMINVSLLQQPTYSNNNSSASTNNNLVNMNTFNNNNNNHSGFELAMEAAPSSPPHSFEPLRLSQENNDEDDEEESIIIPQLFNHEIVLHRQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02377 262 MobiDBLite consensus disorder prediction 1 19 - -
Aip06g02377 262 MobiDBLite consensus disorder prediction 218 242 - -
Aip06g02377 262 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 244 - -
Aip06g02377 262 MobiDBLite consensus disorder prediction 1 21 - -
Aip06g02377 262 Pfam Lateral organ boundaries (LOB) domain 37 136 IPR004883 -
Aip06g02377 262 ProSiteProfiles LOB domain profile. 36 142 IPR004883 -
Aip06g02377 262 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 12 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02377 Aip-Chr6 107840993 107841916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02377 37 246 AS2 family AT3G03760 62.911 2.10e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip06g02377 LOB 2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02377 - - ahf:112698228 416.001