Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02366 ATGGGGTCATGTAGCGGAACAGTGTCGGAATTCGAGATTGGAGGTGTTGAGCCAGTAGGTGGCCTTGGTGGAAGTGGTGAATGGCTTTGCGACACATTGGAAAGCTCGCTGGATATTGGAATGGAAGCAGAAGAGAAGGAGGGAGAACCGCTGGAGGATCGCGATGAAGAAGATAATGGCATCTCTGAACCAGTCATGTACAGTGCCGCAGAGATATTGGAAATGAAATTCAACAACCCTGATGAGGCATCCCATTTCTATGAACAATATAGCCGGGCGAAGGGTTTTGCCATGAGGCAGGGAAAGAAACTGAAAAATAAGAAGGGGGAAATAGTTCGGTACACGTATTTATGCAACAGAAAAGGTTTCAGAAACAAAAAATGGCTAGAGATGCAGGATCGAAAGCGGGAGCACAAGGTTGTCACGCGATGTGGGTGTTTGGCGGAGATGAGGATAAAGCCAAAAGGTGATAGCGGGATTTGGTATGTTTCACGCTTTGTAGATGATCATAACCACGATCTTCTACCTGCAAAGTTTGTGCCGTACCTGCCTTCGTACTGGAAGATTTCTGATGTCGATCTAGCCCATATGAACAGCTTGAGGCAAGTTGGGATTTCTATTCCAAAAATATATGAGTCAATTGCTGCGTAA 651 0.4578 MGSCSGTVSEFEIGGVEPVGGLGGSGEWLCDTLESSLDIGMEAEEKEGEPLEDRDEEDNGISEPVMYSAAEILEMKFNNPDEASHFYEQYSRAKGFAMRQGKKLKNKKGEIVRYTYLCNRKGFRNKKWLEMQDRKREHKVVTRCGCLAEMRIKPKGDSGIWYVSRFVDDHNHDLLPAKFVPYLPSYWKISDVDLAHMNSLRQVGISIPKIYESIAA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02366 216 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 56 178 - -
Aip06g02366 216 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
Aip06g02366 216 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 178 - -
Aip06g02366 216 Coils Coil 211 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02366 Aip-Chr6 107423912 107425027 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02366 FAR1 4.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02366 - - aip:107647209 427.943