Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02345 ATGGCAAAATTCAGAAAATCAATCACTCATTTTCTCAACATATCCTTCATATTCCTCCTAGTATTCCTTCTAATAAAACCTTCAAAAATTGATCCCGAAAGGCATTATAATTGGAAAAGTGCCCCTGCCATCAAGAACAGAAGATTCAACCATGCAAGGCTACTAAGCAGTGACATGAGTGTGGAAGGCTGCACAGACCTGCATACATTCTCCGATGACGCCGCGAAATGCTACTACGTCCAAACCCACGAAGATTGCAGATCAAAGGGTTACATAAACTACCTTCAAATCTTCTATTGCAGCCTGGGAAACTCCCCTGTTCTCGGCCACACACTACTAATCATGTGGCTCTCCGTCCTCTTCTACCTGCTCGGCGACACGGCTTCCAACTACTTCTGTAACAATTTGGAAGGGTTGTCCAAAATCTTAAGACTATCACCAACCATTGCAGGGGTCACCCTTCTCTCGCTAGGGAACGGTGCCCCCGATTTCTTCGCCAGCGTCGTCTCCTTCACCAAAACAAGCGATGGTGCTGTTGGTCTCAACAGCATTCTTGGTGGTGCTTTCTTTGTCTCGAGTGCTGTTATGGGAATCATAAGCATTCTTGTGAGCACAAAAGAGGTTGCGGTTGATAAAGCAAGTTTCATTAGAGATGTTATTTTCTTCCTTTTCTCACTCTTTGTCCTCTTAATCATCATCTCCATTGGGAAACTCTCCTTGTTGGGCTCAATCTGCTATGTTTCTATATATTTTCTTTATGTTTGTGCTGTTTCTGCCACACATTTTATCTATGGAGATGATAAACAAGAAGCTGGAGAATTTGCGGTTGTGTCCTCATCGGATGAATCGCTTGAATCTGGGATTCCGTTGTTGGGTTATGTTGATGATGAAAAACCAAACCACTTAGAGAAAGTTGTTGAAGAAACCAATGATGAAGAGCAACGACCAGTTTTTGATATTTTGAAACATGCGGAGAATAGGATATTTGACTGGAATAACTTGGGGAAGTTTCTACAAATTCTAGAGTTGCCACTTTCTCTACCAAGAAGGCTTACAATTCCAGTTGTGAACGATGAGAAGTGGTCCAAGCCATATGCAGTTATATCGGTGACACTGGCACCAGTTTTGTTGGCAACAGTTTACAACACCCAAAAGGAGAACGTGAGTTCAAGGAGCAGCTTAGTTACCTATTTAACCTCTTCATTAGTTGGAATAATTTTAGGTAACATGGCATGTGTGACCACAAAGAGTTGTAGCCCACCAAGGAGATGCTTGTTCCCTTGGTTATCTGGTGGATTTGTAATGAGTGTAACATGGACTTATCTAATTGCTGAGGAGCTTGTTTCACTATTGGTCTCAATTGGGAACATAATTGGGGTTAGCCCTTCAATTTTAGGGTTAACTGTCCTAGCTTGGGGTAATTCCCTTGGTGATTTGATAGCAAATGGTGCTATGGCTATGAATGGTGGGCCAGATGGGGCCCAAATGGCTATTTCTGGATGCTATGCTGGGCCTATGTTTAATACCTTAATGGGCTTGGGCTTGCCCCTTGTTCTCTCAGCATTGAATGATTACCCTGATCCTTATGTTATTCCTAAGGATACTTCATTGTATCAAACAATACTGTTCTTGATGGGAGGGGTTCTTTGGGCCCTTGTGATTTTGCCAAAGAAGAACATGAAGCTTGATAAATCCTTGGGGGTAGGACTTGTGACTATATACCTTTGCTTCTTGTTTATAAGGATCGCCATGGCTATTGGCGACTTGGCGTAG 1773 0.4264 MAKFRKSITHFLNISFIFLLVFLLIKPSKIDPERHYNWKSAPAIKNRRFNHARLLSSDMSVEGCTDLHTFSDDAAKCYYVQTHEDCRSKGYINYLQIFYCSLGNSPVLGHTLLIMWLSVLFYLLGDTASNYFCNNLEGLSKILRLSPTIAGVTLLSLGNGAPDFFASVVSFTKTSDGAVGLNSILGGAFFVSSAVMGIISILVSTKEVAVDKASFIRDVIFFLFSLFVLLIIISIGKLSLLGSICYVSIYFLYVCAVSATHFIYGDDKQEAGEFAVVSSSDESLESGIPLLGYVDDEKPNHLEKVVEETNDEEQRPVFDILKHAENRIFDWNNLGKFLQILELPLSLPRRLTIPVVNDEKWSKPYAVISVTLAPVLLATVYNTQKENVSSRSSLVTYLTSSLVGIILGNMACVTTKSCSPPRRCLFPWLSGGFVMSVTWTYLIAEELVSLLVSIGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAMNGGPDGAQMAISGCYAGPMFNTLMGLGLPLVLSALNDYPDPYVIPKDTSLYQTILFLMGGVLWALVILPKKNMKLDKSLGVGLVTIYLCFLFIRIAMAIGDLA 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02345 590 PANTHER CATION/CALCIUM EXCHANGER 1 6 587 - -
Aip06g02345 590 Pfam Sodium/calcium exchanger protein 115 256 IPR004837 GO:0016021|GO:0055085
Aip06g02345 590 Pfam Sodium/calcium exchanger protein 431 582 IPR004837 GO:0016021|GO:0055085
Aip06g02345 590 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 587 - -
Aip06g02345 590 Gene3D - 365 583 IPR044880 -
Aip06g02345 590 Gene3D - 145 276 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02345 Aip-Chr6 106832973 106835775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02345 67 589 Antiporters AT5G17860 51.418 2.06e-179 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02345 K13754 - gmx:100818583 800.816