Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02344 ATGGGTTATTCCACCTTGTTGCTGAACGCGTCTTTCCTCATCGTCTTCTCTGTTTTCCTTGTTCTTCATGTCAACTCTCCTTCAGAACAGCTTCCTCTGAGAAAGTACCATTTTACCCTTGGTGACATTGATGAGAATGATGATTCTTGCAAGAGCTTTCACAGCCTCAGTGACAACGAAGCAAAGTGCTTGTACTTGAAATCCAATGACCCTTGTGTCACTGAGGGTTATGTTGATTATCTTTACCTTTTCTACTGCAAATTTGGGGATTTAGCTCTTTTTGGTCAAACCCTTTTGTTCCTTTGGCTATTGGTCTTGTTCTACCTTCTAGCTAACACTGCTTCTGAATACTTTTGCCCTTCCCTTGAGAGCCTCTCAAAATTGCTGAGATTGTCCCCAACAGTTGCTGGAGTAACCCTTCTTTCCCTTGGCAATGGTGCCTGTGATGTCTTTGCAACACTTGTTTCCTTCAATGGCAGTGGCACTGGAGGTATTGGATTCAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCCTGCGTTGTGGTTGGGATTGTTAGCATATCGGTTAGGCATCGAGGAATTCGAGTTAAGAAGTCTGCATTGATAAGAGATGTCAGTTTTCTTCTCTTTGTGCTTGTGTGCTTGTTCGCCATCTTAATTGCCGGCGAGATCAATGTTATTGGGGCAATTAGCTTCTGTTTGATGTATGTTGTTTATGTGGTTATTGTCTACATCTCGTCGACCCGGTGGAAGGGTGACTCTAGCGACGGTCAATCGAGTAATGGCGACGATCCGTCCGTGCCCCTTATCATTGGAATGGAGAAAGGAGTAATTGGTAATGATGAAAATGGATCTCAAGAATGTAGGTTCAACTTTGAGGAGAAATTCTGCTTTAAGAAATCTCCAGTTTGTAGATTTTCACTTTGTGTCTTGGAGTTGCCACTTTACTTGCCAAGGAGATTGACAATTCCGGTTGTTTGTGAAGAGAGATGGTCCAAACCATATGCAATTCTGTCAGCCCTGTTATCACCATTGCTATTGTCTTCTCTCTGGACCCCGGGAAGCCTAACGGTCTATGGAACCGGATTATTAATCGGAATCATCTTAGCCGTAGCCGCATTCTTCACCACCGAGCCATCTAGTCCGCCGAAGAAGTACATGTTCCCTTGGCTTGCAGGGGGGTTTGTGATGAGTGTTACATGGAGTTACATTTCAGCTCAAGAACTGGTTGGATTGTTGGTCTCACTTGGTTACATATACGGAATTAGTCCTTCAATTTTGGGGCTAACAGTTCTTGCTTGGGGAAATTCAATTGGAGACTTAGTGACAAATTTGACTATGGCGTTACATGGTGGGACAGAAGGTGCTCAAATTGCAATATCAGGTTGTTATGCTGGCCCTATATTCAACACTGTGATTGGATTAGGCTTATCCCTTGCAAGTTCAACTTGGTCACAGTATCCAAATTCTGTTATTATACCAAAAGATCCATATCTTTGGGAAACACTAACACTTTTGGTAATTGGATTGATTTGGGCACTTTTGGTGTTGGTAAGAAGGGATATGAAGCTTGATTCACTCTTAGGGGGAGGGCTTCTTGCCGTTTACTTCATTTCATTGTTTCTGAGGCTGATTCAGACATTAGGGACTTGCCAATTTCAGGATATATTACCAAAATGA 1680 0.4304 MGYSTLLLNASFLIVFSVFLVLHVNSPSEQLPLRKYHFTLGDIDENDDSCKSFHSLSDNEAKCLYLKSNDPCVTEGYVDYLYLFYCKFGDLALFGQTLLFLWLLVLFYLLANTASEYFCPSLESLSKLLRLSPTVAGVTLLSLGNGACDVFATLVSFNGSGTGGIGFNTVLGGASFVSCVVVGIVSISVRHRGIRVKKSALIRDVSFLLFVLVCLFAILIAGEINVIGAISFCLMYVVYVVIVYISSTRWKGDSSDGQSSNGDDPSVPLIIGMEKGVIGNDENGSQECRFNFEEKFCFKKSPVCRFSLCVLELPLYLPRRLTIPVVCEERWSKPYAILSALLSPLLLSSLWTPGSLTVYGTGLLIGIILAVAAFFTTEPSSPPKKYMFPWLAGGFVMSVTWSYISAQELVGLLVSLGYIYGISPSILGLTVLAWGNSIGDLVTNLTMALHGGTEGAQIAISGCYAGPIFNTVIGLGLSLASSTWSQYPNSVIIPKDPYLWETLTLLVIGLIWALLVLVRRDMKLDSLLGGGLLAVYFISLFLRLIQTLGTCQFQDILPK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02344 559 PANTHER CATION CALCIUM EXCHANGER 2 552 - -
Aip06g02344 559 Pfam Sodium/calcium exchanger protein 100 244 IPR004837 GO:0016021|GO:0055085
Aip06g02344 559 Pfam Sodium/calcium exchanger protein 391 543 IPR004837 GO:0016021|GO:0055085
Aip06g02344 559 Gene3D - 337 544 IPR044880 -
Aip06g02344 559 Gene3D - 131 271 IPR044880 -
Aip06g02344 559 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 2 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02344 Aip-Chr6 106811386 106813737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02344 8 552 Antiporters AT5G17850 51.510 3.98e-159 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02344 K13754 - gmx:100787016 733.021