Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02327 ATGGCCAACAGTGGCAAAGCATATGTAAAATGCATTATGGATATAGTCAAAGCTTATGGCTGGCAAAGAGTAATAGCCATCTATGAAGATGATGCCTATGGTGGAGAACAAGGGATGCTAGCCCTGCTATTTGAAGCCCTCCAAAAACCTATGAAGATCGTGGTCCCAGACAAAATTATATTTTCCAGGTCTGTGAAGAATTATGATGCTGTTGTTGGGGATATTACCATGCTAGAGAAAAGATTTTCATATGTGGACTTCACTGTGCCATGTGCAGAATCAGGATTGTTAATGTTAGTTCTAGCAAAGTCTGAAGAATCAGCATGA 327 0.4006 MANSGKAYVKCIMDIVKAYGWQRVIAIYEDDAYGGEQGMLALLFEALQKPMKIVVPDKIIFSRSVKNYDAVVGDITMLEKRFSYVDFTVPCAESGLLMLVLAKSEESA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02327 108 SUPERFAMILY Periplasmic binding protein-like I 7 89 IPR028082 -
Aip06g02327 108 Pfam Receptor family ligand binding region 7 72 IPR001828 -
Aip06g02327 108 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 52 - -
Aip06g02327 108 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 67 108 - -
Aip06g02327 108 Gene3D - 6 98 - -
Aip06g02327 108 PANTHER GLUTAMATE RECEPTOR 3.4 1 52 - -
Aip06g02327 108 PANTHER GLUTAMATE RECEPTOR 3.4 67 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02327 Aip-Chr6 106039527 106040202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02327 9 55 Ion Channels AT2G29120 48.936 2.27e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02327 - - ahf:114924053 93.2041