Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02325 ATGGCTGAATCATTCATATTCAATGTGGCACAATCATTGATAGGAAAGCTGACTTCTCCTGCATACAAAGCGGCTACTCAACTCATTGGTGTGTACGATGACTTGCAAGACTTCAAACACACTCTCTCATACGTCAAAGCTGTGCTGTTAGATGCTGAGCAAAAGCAAGAGCAGAACCACGCGCTGCGAGAATGGCTGAAGCAGATCAAGCGCGTTTTCTCCGATGCCGAGATCGTGCTTGACGAACTCGAGTGCGAGATTTTGCGGAAGCAAGTTGTCAAAGCCTATGGTACCACCAAACACAAGGTAGGTCGCTTCTTCTCGAGTTCTAATTCGCTTGTTTTTCGTTATAAGATGAGTAAAAAATTAGAAGAAATCAGGAAAAGATTAGATCTGGTTGCGGCTGATAGGAATAAGTTTGGGCTTGAAAGAATTGATGCTGATAGGCGAGTTGTGCATAGGAGGGAAATGACTTATTCCCATGTTGTTGAGTCAAATGCCATAGGGAGGGACTTTGATAAAGAGAAGATCATAAAGCTTTTGTTGCAGGAAAATCCGCAtatctcagttattccaatagtgggaattggaggtatggggaagactacccttgctaaattggtgtacaatgatcagaggataacagagtcttttccattgaaaatgtggatctgtgtttctgatgactttgacttcaaccaattgttgatcaaaattatcatgtgtactagtgaaggagatcttgcatcttcttattctcctgttggccaacaaaatgtgaaagatttggatgtgcagcaactgcaacatactctaagaaaaaaaattgctgggaagaaattcctactcatcttggacgatgtatggaatgatgatcgtgttaaatggcttgaattaagagatttgctagaaatgatgggttctaacaaaagtaagatcttggtgactactcgtagtcccactattgcttccatgatgggtaccgttagctcttacaatttagaaggcctttctttaaagaattcattgtctttatttgttagatgggcttttaaagaaggtgaagagaagaagtatccgaaattgatgaatattgcgagagaaattgtgaaaaaatgtagtggcgttcctttggcaataagaacactggggagttcattattttcaaaacataagatagatgagtgggaacatgtgcgagataatgagatatggaaattgtcacaaaaggaaaatgacattttacctgttttaaaattaagctatgatcaaatgccatcatatttaaagcattgctttgctatgttctctcttttcccaaaggattacgtattcatcagcgcaactgtttcttctctttggggagcacttggtctccttccatcatcagtagaaaacaagtctttggaagatattgccaatcaatatttacttgaattaatgtcaaaatcttttcttcaGGATTTTATTGACTTTGGGGCTGGCTATTGTTTTAAAATACATGATTTAATGCACGATCTTGCGATCTATGTTGCAAAAGATCAGTGCGTGTGTGTCAACTTCAACGTCCAAAATATGCCTGAGAATGTTCAGCATCTGTCTTTTTTGGTAAAGCATATGCCTGACAAATCTCATATTCCAGAATCAGCAACTCTGAGAACTATATTGTTTCCTGTACATGAAATTGGAGTTGACGAAGCTTTTCTCAATACATCGGTGTTGAAGCATAAATATCTATATATGTTGGACTTAAGTAATTCAACTTATGAAACATTACCTTGGTTCATTCATAAGTTGAAGCACTTAAGATTTCTTGATCTGCAATATAATCGTAAAGTGAAGAGATTGCCTGATTCTATATGCATGCTCCAATGTTTGCAAACTTTCTTGCTTGTTGGGTGTACCGAGCTTGAAGTATTACCCAGAGGTTTAGAAAAGTTAATTAGCCTTCGACGTTTGGAGATAACCACAAAGCAGATTTCTTTGCCTGAGAAGGAGATTGCAAACTTGAAGTTTCTTCAAAGATTGCATATCTCGTTTAGCGAGAATTTAGAGTCTTTATTTCTTGGGATAAAATTACCTACTCTTAAGACATTGATTGTTGGAAAATGTAGCAATTTGAAGTTTCTGACAATTGATCCCAAGCATTTTCCTCAATTAGAGTATATCCATATTAATGGGTGTGACAAGTTGGAATTTCCAGAGGAATATGACTGTGGAACCAAAGACTCCAACATGAGATTGAAATGTATATGGCTTGAATCTTTACCACAGTTGGTGACCCTGCCTCCTTGGGTTCAATCATCTACAAATACATTACACACCTTGATAATTAGAGGTTGCATCAACTTTGAGGTGTTTCCTAAATGGCTATCATCTTTGATTTGTTTGAATAGACTTAGAATTTGTGATTGTCCAAAGTTGATGTCACTCCCGAATGATTTTCATTGCCTCACAGCCCTTGAACGTTTGGTAATTGTCAATTGTCCAAAGTTGTGTAGAAAATGTGTGCCAGGAGTAGGAGAGTATTGGCCCAGGATATCTCACATCAAGGAAGTAATCATTGATCGACCAGAACATTTTAGATCGGCG 2592 0.255 MAESFIFNVAQSLIGKLTSPAYKAATQLIGVYDDLQDFKHTLSYVKAVLLDAEQKQEQNHALREWLKQIKRVFSDAEIVLDELECEILRKQVVKAYGTTKHKVGRFFSSSNSLVFRYKMSKKLEEIRKRLDLVAADRNKFGLERIDADRRVVHRREMTYSHVVESNAIGRDFDKEKIIKLLLQENPHISVIPIVGIGGMGKTTLAKLVYNDQRITESFPLKMWICVSDDFDFNQLLIKIIMCTSEGDLASSYSPVGQQNVKDLDVQQLQHTLRKKIAGKKFLLILDDVWNDDRVKWLELRDLLEMMGSNKSKILVTTRSPTIASMMGTVSSYNLEGLSLKNSLSLFVRWAFKEGEEKKYPKLMNIAREIVKKCSGVPLAIRTLGSSLFSKHKIDEWEHVRDNEIWKLSQKENDILPVLKLSYDQMPSYLKHCFAMFSLFPKDYVFISATVSSLWGALGLLPSSVENKSLEDIANQYLLELMSKSFLQDFIDFGAGYCFKIHDLMHDLAIYVAKDQCVCVNFNVQNMPENVQHLSFLVKHMPDKSHIPESATLRTILFPVHEIGVDEAFLNTSVLKHKYLYMLDLSNSTYETLPWFIHKLKHLRFLDLQYNRKVKRLPDSICMLQCLQTFLLVGCTELEVLPRGLEKLISLRRLEITTKQISLPEKEIANLKFLQRLHISFSENLESLFLGIKLPTLKTLIVGKCSNLKFLTIDPKHFPQLEYIHINGCDKLEFPEEYDCGTKDSNMRLKCIWLESLPQLVTLPPWVQSSTNTLHTLIIRGCINFEVFPKWLSSLICLNRLRICDCPKLMSLPNDFHCLTALERLVIVNCPKLCRKCVPGVGEYWPRISHIKEVIIDRPEHFRSA 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02325 864 PANTHER OS08G0543100 PROTEIN 28 833 - -
Aip06g02325 864 PRINTS Disease resistance protein signature 190 205 - -
Aip06g02325 864 PRINTS Disease resistance protein signature 373 387 - -
Aip06g02325 864 PRINTS Disease resistance protein signature 275 289 - -
Aip06g02325 864 PRINTS Disease resistance protein signature 691 707 - -
Aip06g02325 864 Gene3D - 10 124 - -
Aip06g02325 864 Gene3D Ribonuclease Inhibitor 743 840 IPR032675 -
Aip06g02325 864 PANTHER DISEASE RESISTANCE PROTEIN RP 28 833 IPR044974 GO:0006952
Aip06g02325 864 Gene3D - 422 510 IPR036388 -
Aip06g02325 864 Pfam Rx N-terminal domain 11 102 IPR041118 -
Aip06g02325 864 CDD RX-CC_like 2 131 IPR038005 -
Aip06g02325 864 Pfam NB-ARC domain 173 423 IPR002182 GO:0043531
Aip06g02325 864 Gene3D - 149 331 IPR027417 -
Aip06g02325 864 Coils Coil 66 86 - -
Aip06g02325 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 435 IPR027417 -
Aip06g02325 864 Gene3D - 337 421 IPR042197 -
Aip06g02325 864 Gene3D Ribonuclease Inhibitor 520 735 IPR032675 -
Aip06g02325 864 SUPERFAMILY L domain-like 499 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02325 Aip-Chr6 105971179 105973834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02325 176 439 WRKY Transcription Factor Family AT5G45050 24.151 2.97e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02325 - - gmx:100781317 974.541