Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02322 ATGATCCATACATCGAGGAATGTTCGAGAAGGAACTATTCGAGTCATTCATAGGCAGATATTGAGGATGAAGAGGTACGACTGGACTCTTTACGCATGGTATATTAAAAATGAGTTGGAGTTCGGAATTGAACCGGAGGACTTAGGCGGTGGCCATACGGACATCGTTGGTCCATATGAGGAGTGGAGGAGTACGTACGAAGCAATTAAAGCAGAGAAAGTGCTTCGGATGGAGTTTAGTAGTCCAGAAGAAGCACGGAAGTTCTACAACGATTATAGTCGAGTAAAGGGTTTTGCGACGAGGCAGGGGAAGAAGATTAAGAATATTTCTGGGAAAATTGTTCGGTACACATTTGTTTGCAACAGAGAAGGATTTAGACACAAGAAGTGGTTGGAAAAGAGCGATCAAGAGCACAATCACGAGTTGTTATTGTCAAAGTTTGTTGAGTATCTGAGGTCCCACCGAAAGATTTCTGATTTTGAGAAAGCACAGTTAAATAGCATGAGGGAAATTGGTATAAGTATCCCCAAAATATATGAATCGTTTGCTACACAGGCCGGGGGCTTTAATATGGTTTCTTTCACTAAACAAGACATGTATAATGTGTTAAGGAGGCTACGGGCTATGCAAAATGGAGATGTCAATGCCACATTTCGTTATTTGGAGGGCATTGCCCAAGTGGATGAAAAGTTGTTTTGGCGTTACAAGACTGGGCCGAGTAAGCAACTTTGTGATCTATTTTGGAGTGATGGAGCTAGCCAGGAAGATTATCGGATATTCGGTGATGTACTTGCTTTTGATGCAACGTACGGGAGAAACAAGTACAACCTACCAGTTGTTGTGTTTTCTGGGGTTAACCACCACAATCAGACATGTGTTTTTGGTGCTGCCATGGTTTCACATGAATCACAGGAGTCGTATAATTGGGTATTGGAGAGGTTTTTGGAATGCATGAAAGGGAAAACACCTAATGCAGTAATTACAGATGGAGATCCGGCAATGGGAATTGCAATCCAAAAGGTTTTTCCCGAGGCCCATCATAGATTGTGTGCATGGCATCTTTTGAGGAATGCGACGGCAAATATTTCGCAGCCTCAGTTCACTCAGTTGTTTAGACAATGCATGTTGGCTGATATTGACATACATGAGTTTGAGAAGCAGTGGGAGGCTATGTTGGAAGAGTGTGGTGTAAGGGAGGTCGAATGGATGAGGGACTTGTATGCGAAAAAGTACTCTTGGACTACGGCTTACATTAGGGGTCGCTTTTATGCGGGACTAAGGACTACTTCACGATGCGAGTCTTTGCATACAAAGTTGGGGAGGTTTGTTGAGAGTCGTTATGGCATACTAGAGTTTATAACTAACTTTCAGCGATGCATTGATTTTTTGCGAGACAACGAGGCAGAGTTGGATTTTAGGTCTTGTTATGGAACACCAGTGCTTCAAACTGAGTTTGTTGAGCTAGAGAAGTCAGCCGCATTGAAATTCACTCGTGAGATATTCTTTAGAGTTCGTGAGTCTCTTAAGCGATCGGTGCGGATCAATATCAATGGGTGCAATCACACATCGAATGGCGATGTATTTTTAGTTGAGAAATATCGTAAGTCGGGGTTGAATTGGCAAGTATTGTATGATGGTCAAGGGCAGAAGTTTGGATGTAGTTGCATGAGGATGGAGTCCTTTGGTCTGCCGTGCATCCACATACTAGCTGTTGTCGTTAGGCTGAATCTGTGTGCGATTCTGGATAGTTTGGTTCTAAAGAGGTGGTCGAAAATAGCAAAGAGTGAAGCAGATCATTGGTCAATTGTTAATGAAGCTGTTAACAAGGACATTTTATATAAGAGAAAGGTGGTTGCATTTTTACATCTGTGCACGCGGTTAGTAAAGTTTTCCTGTTTTGACGAGCATGACTTCAGAGTGTATGCAGAGAGAATTGTGAGGGATACCTCCATGTTGGAGTCAAAGTACGGTGTTGCTAGGGAATCTAGTGGAGCAAGTCATGTTTGGGGAGAATTTAGCAGAATAAATGATCCGGTACGTGTGAGGACAAAGGGAACTGGGCATGCAAACATGTCATCGACAATGACGGGGAAGAAGAGGCGCAAATGTAGCAATTGTGGTCGTCTCGGACACAGGAGGACCCGTTGCACCAACGCACCAGCGTCATCCGCAATGGACAATAGAAATGGTGCGGTAAATGGCAGTGAAACTGGCAAGGACGGGGCTGATACCACAGGCCATGTAAAGCTGTCTACGACAACAGATGGACTCTCCAAGTCTTTTGTGTGA 2289 0.4364 MIHTSRNVREGTIRVIHRQILRMKRYDWTLYAWYIKNELEFGIEPEDLGGGHTDIVGPYEEWRSTYEAIKAEKVLRMEFSSPEEARKFYNDYSRVKGFATRQGKKIKNISGKIVRYTFVCNREGFRHKKWLEKSDQEHNHELLLSKFVEYLRSHRKISDFEKAQLNSMREIGISIPKIYESFATQAGGFNMVSFTKQDMYNVLRRLRAMQNGDVNATFRYLEGIAQVDEKLFWRYKTGPSKQLCDLFWSDGASQEDYRIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGAAMVSHESQESYNWVLERFLECMKGKTPNAVITDGDPAMGIAIQKVFPEAHHRLCAWHLLRNATANISQPQFTQLFRQCMLADIDIHEFEKQWEAMLEECGVREVEWMRDLYAKKYSWTTAYIRGRFYAGLRTTSRCESLHTKLGRFVESRYGILEFITNFQRCIDFLRDNEAELDFRSCYGTPVLQTEFVELEKSAALKFTREIFFRVRESLKRSVRININGCNHTSNGDVFLVEKYRKSGLNWQVLYDGQGQKFGCSCMRMESFGLPCIHILAVVVRLNLCAILDSLVLKRWSKIAKSEADHWSIVNEAVNKDILYKRKVVAFLHLCTRLVKFSCFDEHDFRVYAERIVRDTSMLESKYGVARESSGASHVWGEFSRINDPVRVRTKGTGHANMSSTMTGKKRRKCSNCGRLGHRRTRCTNAPASSAMDNRNGAVNGSETGKDGADTTGHVKLSTTTDGLSKSFV 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02322 762 ProSiteProfiles Zinc finger SWIM-type profile. 540 576 IPR007527 GO:0008270
Aip06g02322 762 MobiDBLite consensus disorder prediction 684 704 - -
Aip06g02322 762 MobiDBLite consensus disorder prediction 686 700 - -
Aip06g02322 762 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 119 614 IPR031052 GO:0006355
Aip06g02322 762 ProSiteProfiles Zinc finger CCHC-type profile. 701 718 IPR001878 GO:0003676|GO:0008270
Aip06g02322 762 MobiDBLite consensus disorder prediction 718 762 - -
Aip06g02322 762 Pfam MULE transposase domain 263 357 IPR018289 -
Aip06g02322 762 PANTHER OS02G0262500 PROTEIN 119 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02322 Aip-Chr6 105760241 105763048 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02322 MULE 8.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02322 - - aip:107620408 881.322