Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02318 ATGGAAGAGCAAGGGCAGCAACACCATCAAGACCCAAACAGAAGCCATAGCCATGGTGCTGGTGGTTCTTCCTCCTCCTCTGAGAAGCAGAGTAGCGAACCGGTGCGCTCAAGATGGACGCCCAAACCGGAGCAAATACTTATTCTTGAATCCATCTTCAACAGCGGCATGGTTAACCCTCCAAAGGACGAGACCGTCAGGATAAGGAAGCTTCTAGAGAAGTTTGGGGCTGTCGGCGACGCTAACGTTTTCTACTGGTTCCAGAACCGACGGTCCAGATCTCGTCGCCGACAGCGCCAGATTCAGCAGCAGCAGCAGCAACAACAACACCACCAACACCAGCTAGGTGTTGGTGTTGTTGGGGTTGGTGTTGGTGTTGGTGGTGCAATTCAGTGTGATCAAGATCACCCTGGTCAACCTGCACTCTCAGTAGGGAGTGCTTTGGGTTTCGGAGGTTCTTCTTCTTTCGGAGATTCTTCTTCTTGTTCTTTTCATCTTCCTCCTCCTCCGACTGGTGCCGGTGGCGGTTCTTCTTCTTCATCTTCCTTCGGTGGTGAGCAAGAAGCCATGGATAACTTCTTCTCTGGTGTTCCTCCTCCTCATCATCATACTCCTCAAATGGGGTTCCAGGAAATTGATCACACTTCATCTTTGTTCCCTCATGTTCCTCCAAATTTCACCTACAACTCCGGATTTGGGGGCAATAATGTGTCAGGATTCATCACAGTGTTCATCAATGGAATTGCAACAGAAGTTCCAAGAGGTCTTATAGACATCAAAACATTGTTTGGTGAAGATGCAATTTTAGTTCATTCTTCTGGAGTGCCACTTCCAACCAATGAGTTTGGCTTCTTAATGCAGACCTTGCAGCATGGTGAAAGCTACTTTCTGGTTCCAAAGCCAACATAA 909 0.4829 MEEQGQQHHQDPNRSHSHGAGGSSSSSEKQSSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQIQQQQQQQQHHQHQLGVGVVGVGVGVGGAIQCDQDHPGQPALSVGSALGFGGSSSFGDSSSCSFHLPPPPTGAGGGSSSSSSFGGEQEAMDNFFSGVPPPHHHTPQMGFQEIDHTSSLFPHVPPNFTYNSGFGGNNVSGFITVFINGIATEVPRGLIDIKTLFGEDAILVHSSGVPLPTNEFGFLMQTLQHGESYFLVPKPT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02318 302 MobiDBLite consensus disorder prediction 1 15 - -
Aip06g02318 302 MobiDBLite consensus disorder prediction 1 42 - -
Aip06g02318 302 SUPERFAMILY Homeodomain-like 32 102 IPR009057 -
Aip06g02318 302 Pfam Homeodomain 36 96 IPR001356 GO:0003677
Aip06g02318 302 MobiDBLite consensus disorder prediction 159 192 - -
Aip06g02318 302 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 300 IPR044558 GO:0003700|GO:0048830
Aip06g02318 302 MobiDBLite consensus disorder prediction 173 188 - -
Aip06g02318 302 MobiDBLite consensus disorder prediction 95 114 - -
Aip06g02318 302 Gene3D - 22 115 - -
Aip06g02318 302 MobiDBLite consensus disorder prediction 16 38 - -
Aip06g02318 302 ProSiteProfiles 'Homeobox' domain profile. 32 97 IPR001356 GO:0003677
Aip06g02318 302 SMART HOX_1 34 101 IPR001356 GO:0003677
Aip06g02318 302 MobiDBLite consensus disorder prediction 99 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02318 Aip-Chr6 105449848 105452830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02318 10 298 Wox Gene Family AT3G03660 51.027 6.83e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip06g02318 Homeodomain 1.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02318 - - adu:107494279 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02318 06 105449848 105452830 Aip06g02318 06 105449848 105452830 ECH