Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02306 ATGTCCATAAACGAGGATGATTTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATACAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATGCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAAGCCTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACAACGTGGTTAGGGATAATCAAGGTAGAATCATTAGTAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGTAA 396 0.4015 MSINEDDLKNDSDNDLGDDFDYQPNTEDDAEDDDVDSLDATSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDNVVRDNQGRIISRQLVCNKEGWRNMRYLDLDDRSREARSLT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02306 131 Pfam FAR1 DNA-binding domain 74 119 IPR004330 -
Aip06g02306 131 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 119 - -
Aip06g02306 131 MobiDBLite consensus disorder prediction 1 44 - -
Aip06g02306 131 MobiDBLite consensus disorder prediction 11 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02306 Aip-Chr6 104728798 104729193 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02306 FAR1 3.6e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02306 - - adu:107460934 241.891