Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02274 ATGGCGACAAGAAAGGAAGAAGAGAGGAACGAGAAAATCATCAGAGGTCTCATGAAGCTTCCGCCCAATCGAAAATGTATTATTTTTATTTTTATTTTTTTTGGCCCGCAATATGTTTGTACCAACTTTTGGACCTTCGTTTGCATGACTTGCAGTGGAATCCATCGTGAGTTTACCCATCGTGTGAAGTCTGTATCTATGGCAAAGTTCACATCACAGGAAGTTGATTCTCTTCAGAATGCGGGTAACCAGCGTGCACGGGAAATATATTTGAAAAATTGGGACTTCCAGAGGCAACGGCTGCCAGATAGCAGCAATGTCGATAAAATAAGGGAGTTTATCAGGCACGTATACGTCGATCGAAGATATGCTGCAACCAAATCTTCTGACAAGCCTCCAAGAGATATGCAGGCAATCTATTCTTGCATATTTATTTATGATACACGGCGTGCTAGTTCTTATCACTCCTATTCACAAAGCCCTCCATATGATTACCAATACGAAGATCGACGGTATGGGAAACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCAGATAAAGTTCGCTATGAAGGAAAGATGAGTAGTATTATCTATAGTCCTGGACGCTTCAGTGATCATGCCTATGAGGATAGATTTGCCAATGAGGGATCTGGTCCGAGAATTTCTGACTTTTCTGTGTCTAGTGGGGGTGAGCAATTCAAATCTGAGGTTCAGTCTCCCAACTTTCATAAGGATATTGGATTTCATAGTCCACCCTATCGGCATTCAGGTCACCATTCAAGTGAAGATGTCTGGGCTTTTGCAAGGAATACATCTCTGGAAACTAATGCTAAGAGAGATATGGAAGGAATTCGGCTTCCACAGAGGACTGCTTCACTGGGATCAATGGACAGCAACCTGTCATCTTTCAGATCTCACAATTCTGGTGGTTTAGTTGATTTTTTCTCTGAACCTGTCCAAGCTTTTGAACCGCTACAGACTAAAGTTTCTTGTGTTCCCCAACCACCTGGTCCAGCAGGTTCTACTAGCTCTGATATTTCCAACGCACCTGTTGCAGCAGAACCATCCATTGATCTTTTTCAGTTGCCAGGAGCACCCTCTCAGTCTACATCAGTGGATCTGTTTCAAGCATCTGTTTTGTCTGCAGTTCCATATTCCAATGAGAGTCAACCAACACAAACTTCCCAACCTTCATCAGTTGACTTTTTTGCAGACCTTTCTCAGCAGCCATCAACTGCAACCTCAGATGAAAAGTCATTGGAGTTATCTGCCCCTAAAAATGAAGGTTGGGCAACATTTGATATGCCTCAGTACACAGCATCTACTGCAAAAGTTGAAACTCCAGCAGTACTGCCATCAACTGCTGACACATTGCAGGACAGATTTGATCCATTCTTGAACTTGAATGGAGATATGCAATGGCCTTCATTTGAAACTTCTGGTGTTAGTGTTCCTTCTTCAGTTACATCTAATGTATGGCATGATGGTGCATGGAATGGAGAAGAACAAGTTTCTGTGACAGCAACAAGCACTCAACCTTGGAGTGCATTTGAAGATTCTGTTACCCCGGCTTCTGCGGATGGCCTTAATCAGGGATTACAACTGCAAAATCTTCCATCAACTGATGATCAATATTTGGATTTAAGAGCTTCTGAGGGGTGCAATGAAGGTGGGATGCAAGGCATTGCCCCTATTGGCGGGTTTGATGATCATGAAATCTCATCAAATTTTAGTGGTGGCTCAGCATATCCTCCCTCTGCAATTCCTCCTATGGGAGAGAGTCAACCTAATGGAAACAGTCATAAATCAACTAATCCATTTGATTTTCTTGATGATGCTGATGTATCAGATGTAGAGCACGGTAATATGTTTCTTGATCTTAGCTCATTGCAAGCTGCTCTGCCCGATGCGCAGTTTCAACCCACTTTCCATAGTGGTATTGCCGAACCATGGCTTCCTCAAAATTCAGTTAACTCCTACATCTCCTCTGCTGGACAAGGTAGTCTTCCAAGACTAGTCATGCTGAGGAATATCCAGACGCAGGAACCGGTTGCATCTTTTGGGGGAAATCCTTTTGCATAA 2085 0.4317 MATRKEEERNEKIIRGLMKLPPNRKCIIFIFIFFGPQYVCTNFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVDSLQNAGNQRAREIYLKNWDFQRQRLPDSSNVDKIREFIRHVYVDRRYAATKSSDKPPRDMQAIYSCIFIYDTRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKVRYEGKMSSIIYSPGRFSDHAYEDRFANEGSGPRISDFSVSSGGEQFKSEVQSPNFHKDIGFHSPPYRHSGHHSSEDVWAFARNTSLETNAKRDMEGIRLPQRTASLGSMDSNLSSFRSHNSGGLVDFFSEPVQAFEPLQTKVSCVPQPPGPAGSTSSDISNAPVAAEPSIDLFQLPGAPSQSTSVDLFQASVLSAVPYSNESQPTQTSQPSSVDFFADLSQQPSTATSDEKSLELSAPKNEGWATFDMPQYTASTAKVETPAVLPSTADTLQDRFDPFLNLNGDMQWPSFETSGVSVPSSVTSNVWHDGAWNGEEQVSVTATSTQPWSAFEDSVTPASADGLNQGLQLQNLPSTDDQYLDLRASEGCNEGGMQGIAPIGGFDDHEISSNFSGGSAYPPSAIPPMGESQPNGNSHKSTNPFDFLDDADVSDVEHGNMFLDLSSLQAALPDAQFQPTFHSGIAEPWLPQNSVNSYISSAGQGSLPRLVMLRNIQTQEPVASFGGNPFA 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02274 694 CDD ArfGap_AGFG 11 125 - -
Aip06g02274 694 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 131 IPR001164 GO:0005096
Aip06g02274 694 PANTHER ARFGAP/RECO-RELATED 1 694 IPR044820 GO:0005096
Aip06g02274 694 SUPERFAMILY ArfGap/RecO-like zinc finger 10 124 IPR037278 -
Aip06g02274 694 SMART arf_gap_3 11 131 IPR001164 GO:0005096
Aip06g02274 694 Gene3D Arf GTPase activating protein 1 135 IPR038508 -
Aip06g02274 694 Pfam Putative GTPase activating protein for Arf 13 125 IPR001164 GO:0005096
Aip06g02274 694 PRINTS HIV Rev interacting protein signature 44 61 IPR001164 GO:0005096
Aip06g02274 694 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Aip06g02274 694 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED 1 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02274 Aip-Chr6 103912503 103918566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02274 14 118 C2H2 Transcription Factor Family AT4G05330 32.773 1.93e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02274 K15044 - gmx:100794964 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02274 06 103912503 103918566 Aip06g02274 06 103912503 103918566 ECH