Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02258 ATGGGGTCTTGCTTTGAACAACTTGCAACGGAGGCTATTTCAAAACTTGGAGATTTGATAGTGAAGTCCACCGTAAAGCAATTCGAATATCTGATTTGTCACGAAAGACTTGTCGGCAACCTAAGAAAAGAACATAAGAAGCTGATGGGCATGAAAGATGCATTGAAAGGACAAGTGGAAGCAGATAGAAGTAGAGGTCTTGTAGTCGCAAATAACGTGCAAGAGTGGCTCTCTGATGTGGAAGCGATTGATGCGAAGGTTCATAAACTCTATGAAGATGCTGTAGAAAACAAGCGCAAGAAATGTGTTGGTGGAAGACTTGATTACTCATTGGGCAAGCAAGCGACAAGAGCATCACAAGATGTTGTAAGCTTGGCGGAGCAGAAAGATAAACTTCAACCCATATCATATCCTAAGCCTGCACTAAGGCTTGGACCAACCTTCACTCAAGACATCAAGGGGTTGGAGTCGAGAAAAAAGATCATTGGGGATGTTATGGAGAAATTGAAGGATGACAAGATCAGAATGATTAGCATTTGTGGCATGGGTGGGGTGGGAAAAACCACCCTAGTGAAAGGTGTTATCAAAGTTGTTGAATCAGAAAAGCTATTCGATAAGGTTCTGATGGCAGTGGTGTCTCAAAATCCAAATTACCAAATGGTCCAAGCTCAAATTGCCGATTGGCTAGGGTTGCCATTCAGAAGTGGGAGCGTGCAAGGAAAAGCACGGGAATTACTTGATTACTTGCAGGGAAGTAGTAGGGTGTTGATAGTGTTTGATGATGTGTGGTCAGAGCTTGATTTTGAGAGCATTGGAATTCCTTCCCTTGGACATGAGAAAGTATGCAAGATATTGTTCACATCACGAAACGAAGAAGTATGTCGTAAGATGGGAAGCAAGGAGAATATCCAGCTTCATGTGTTGCCTGAAGAAGAAGCCTGGGACCTATTTCGGGACATGGCAGGGGTTGACACTACAGACAAGGCCAACATAAAGCACATTGCAAGGAAGGTTGCAAAAGAATGCGGAGGCTTGCCCCTTGCTATTGTGACAACAGGAAGTGGGCTACGAAACAAAGCTAAGCCTCAATGGGAGTATGCACTTGAGCAACTACGACATTCTAAGTTGCAGGATAAGGTTCAATCAAGCATTGAGCTTAGCATTACATCTTTAGGAACTGACGAACACAAATATTGCCTTTTCCTTTCCGCCTTGTTTCCTGAAGACTTTGATGTTCCGGTAGAAAGTGTGCTGCGTCATGCTGTGGGGATGCGATTGATTAATTTTGCTGGTGCGCTGGGAAAAGCAAGAAACATGGTGGACACTTTGGTGGATGACCTCAAAAGGTGCTTTTTATTGCTGGAAAGTGGAAAACGTGGCTGTGTGAAGATGCATGATGTTGTACGCGATGTTGTCTTATCAATTGCATCTCCAAAAGAGCACGGCTTCGAGGTGCGTCAGGGTAATGATGAATTGAAGCAGTTGAAGAAACAAGACAAGGTGGATCATTTCAAAGCACTGTCACTCATTTTGGCAGCTGCAATCACCAATGGCATAGACTGTCCAATGCTTGAGCTCTTTCAAGCGCGATCAGAAAGAGAGGAAGCCATTTTGTGGCCGGAGAATTTCTTCCAAAGAATGAGTAAGATCAGAGTTTTGACAATGAACAAGTTGCGCATTCCAACAATGCCGTCTCTTTTCCAAACCCCCGTGACCTTAAGGACATTGCAATTAGAAGATTGTGATGTTGGAGATGTGTCCGTGATTGGCAATATACTTGTGGAACTCGAAATCTTAAGCCTCTCCCGCTCTAACATTAAAGAACTTCCAACTGAAATCGGACAATTAAGCTCTCTGAAATTGCTGGACTTGACAGAATGTAATGAACTTGCCATCATTTCAGATAATGTCTTTGCAAGGTTGTCTCAGTTGGAAGAACTTTATTTCAGGGTAAGAAACTTCCCTTGGATGCTAAACAAGCCAATTCTCGGTGAGTTGATAGAACTTTCTCAACACTTGAAGGTTTTTGAAATCCAAGTAAGAGAGGTAGAAATTCTGCCTAAAGATTTGAGTTTCAAAAATATAGAGAGGTTTTGGATTTACGTGACTCAATATTGGGATGACGATCGTGGTTTTGGATATCTGGAGCCAAATAAGTTAGTGTTCAGACATACAAATTACAATAAGTCTATCAAGTGTAGCCCAGTACTAATGCAATTGATTAAGAGATGTGAAGTTCTCAAGTTAGAAGACGTGAAGGACTTGAAAAATGTGATTTGTGAATTAGATGACAGCGGATTCCAATGCTTGACAAAACTAATACTAGATTCATGTCCAGATGTTATGTATGTTGTAGATTGCATCACTGCAACTTCTTACACTGCCTTCCCGCTATTGAAGTCATTGTCAATATTTAATCTCCCAATGCTAAAGGAGATATGTAAGGCATCCGACAATCACCATAAAGTCAACAACCCGTTGATTTCTGAGTTCTTAAATTTAGAGAAATTGTATCTGCGGCGTCTTCCACTATTCACTGGCTTCGGCAATGCCATCGATTCAACTGAGCCACCTTCATCAACAGATTCATCTCATCGTGGTTCGAGTTGCACAAATGAAAGAGTTAATGCTTCACAAACTAAGGAAGATGAGTCTATGTCTAAATCAAATTGTCAAAACAAGTTATTTTCATCTATTTGGATGCTACAATTTCCAGTATTGGAAACCATCACCTTAGAGACCTGTCATTCCTTGGAGGAAGTATTTGACTTGCGAGAATATTCAAAGTCGTCGAATACCCAAATGTTTCCTCAGCTGCGAGAAATCCACATCGATAGTCTTCCTAAGCTAAAATATGTGTGGGGTAATGTTCCGCATAGTGTTGATGGGTTTCACAATTTGAGATCAATTGAAATTGAGTCATGTGACTCTTTAAGTCACGTGTTTACACCAGCCACTGTCAAAGCAATGGTGAATCTTGAGACAATAGACATATATTCTTGCAACTCGATGGTGGCTTTAGTTGCTGATGAAGAAGAGGGAGATCTTGAAACCAAAGGAAGAGAACATACTATCATCTTTAATAAATTATGCGCTTTATCACTCTATAGACTTCCGAATTTTGAAAACTTGTATACAGATTCTGCAAAGTTAGAATGGCCATCATTGAGAACATTCTATTTTGGGTATTGTCCCAAGTTGAAGATATCTTTGATACCAACCCAATTGAAGACAGAAAACAGGGACTTTAGCAATTCCAACTCATCAAGCTCCTCTCATCGGCCCCTTATTGGTTGCATGCCTTGGCCACTTACATTTGTTCGCCACCGCAGTCAAGAGACTACTACAATCATGGAAGCATCATTGGCACAAGATCAAGAACCTGCAATTTCTGAAATCAAGGGCAAGGCAGAAATAAGCCATGTACCAATTCTTGAATATATTGATCTGGGAGACTGTGATTCAGTGGAAGAAGTAGTTTTGCTTGAGGGAACACACAATTCCAGCATTGACATTTGTGATTATGACAATTTAGAAAAAAGAACAAGCATGATGGTTACTTTCACTCACTTGGTGTCACTTGAATTGTCTGGACTACCAAATCTTGAGAATTTTTGTTCTTTTGCAATCAACGGCAAGCAAGAAGGCAGGGATTCTAATGAAGGCAGTGAGAGAATATTGAGAGAAAAGCCTTTTATTAATGGATTATTAGTTCCAAACTTAACATATCTATACATGTATAAGTGTGACAAAATAAAGATATTGTTCTCTTTTTCAACTTTTGGAAGGCTTAAAAATTTAAGAGTAAGTGATTGCAAGAACATAGAAGAAATAGTATCCAACAAAAAGATTAACACAAGTGAAGATAAAGTCATGTTCCCAAAATTAGAGAAACTAAGTCTTGTAAGCTTACCGAAACTAAAAGCCTTCTGTCAAGTTTCCTACTCCTTTGAGTTGTCATCTCTGCAAGAAGTAATGATTGATGACTGTATGAATATGGAAGTGTTTTCACGGGGATCTTGTCATACAACTAAGCTCAAGAATGTCACCATGAATTCGAAGGCAACAACATACTTCGAGTGCAATATCTCTGTGCAAAAAGAAGACCAGTTGAATTCTACTATAGAGGGATTTAGAAAATTTATGGCATTACAAGAAGAAAAGATGATTAGGTGGAGCAATCTCCATGATAAAGACATAATTAAGAACTTGTTTGAGATTTCAGTTATGAATATCAGTGGGTATCATGAACTCTCAATGCTTGTTGAGCTCAAGGAGATGCGCATGCTTCGACATGTAAGGGAACTAAGTATTACTAGTTGTGATTCACTAGAAGAGGTGTTTGAAGCAAGAGGAGAAATGCTTACAAAGGAAGGATATGATCAAAGTATAAATTATGGACTAGAGAGCATAAAATTACAAGATTTACCAAAAGTGAGGAGCATATGGGGACTCAATATTGTGAGGCATGTAAGTTTTACCCAGTTAACGTCAATTGAAATTGCAAGATGCAACAATTTAAAGTGTGTGATGTCCTATTCTGTTGCCAAAAGCCTTGTGGAGATAAAAGAACTAAAAGTTAAAAACTGTGAGATGATTGAAGAGATTGTCAAAAAAGAAGAGGAAGGGAAAATCATGAACATGGGTGCAGGCTGTAAAGATAAGACTTTATTTCCAAAATTGGAGAAGTTGAGTCTTGAAAATTTGCCGAACTTGAGATGTTTCTGTTATGGAGATTATGACTATGACATCCCATTGAGCAATGAAAACGAAGATAAGAAGAAACAGGAACAGGTGCAGGTCTCATTTCCCCAATTAAAAGAAATAAGTTTAACTGGTGTGCCCAACCTCCAATGTTTCTGTGGAGGGTCATATGACTATGATCTAATGCTCTTATCACCTTCCTCACAAATTGAAACCTTTTCTAATGGAAATGGAAAAGTAATTGTAAGCACACCTAACCTTCACAAGGTTAATAATGACACGCTCACCCTTGGAGACATGAATTTGACACTATATTATCTTCACAATTATTCAGGCAAATATAAGGTGGAGTTGCAAGAAGTAGACACATTTGAATGTATTGACGAGAAACCTCAATACAAGCACTTGGTGGGCTACATGAAGAGGGTATTAAGGCTTGAAGTTGAGAGCTGCAACAAGCTTCTCACATGTGTCCCATCCAACACCATTCATTCATTATTATTCCAACATCTGAAAGAGCTTCATGTACGGCAATGTCAGATTATGGAAGTTGTATTTGAAGGGACTGGCACTGGGATTCATAAATCACAATTAGTAAGGATGAGGTTGCATTCTCTGCCCAAACTGAATCGCATTTGGAGAAACAACAACTCTGTCATAGGCTTTGAGAATTTGAATACTCTAATAATTAGTAGGTGCCATGATTTGAGGTTTGTGTTTCCAAATGTGTCCGCTGCCAGAAGCCTTTCGAATCTGAAAGCACTTGATGTGCAGGGATGTAAAGAGATGGAAGAGATCATTGGGAACAATAATAGTAATAAGTCTGTGCAGCATAAGGGAGCAAAGATTATATTCCCAAATTTAGGCACCATTCGGCTGAGTAAGTTACCGAAGCTAAACAGCTTCTGTTCAATTAGCTCTTTCTATTTCGAGCTACCACATTGTGGACGGATAAAAATTAAAGAATGCCCAAAGATGGAGACCTTCTGCTCTGCGACCTTATACACACCAGAGCTAAGGAGATTACAACTGGACGAGTACTCTTTTCTTGCAACACATACTTTATTTAAGGCTGTTATCCCTGTTTGGAGTATGGATTTGAAACAAAGATTATCATCATTCAGAAGAAGCTCAATAGAAAAAATTCTGACTCCTCAAGAGAATCAAGCAAAGATTGATGAAGTCAGAAAGATCATTGGTCCGGTTGCAAATAAGTTTCCAGTTATGTGTTCAGATGCATCAATACAAAGGTACCTCAGAGCAAGAAAAAATAATGCTAAGAAAGCAGCAAAGATGCTCAAATGCAGCTTGAAATGGAGGTTAGAGTACAAGCCTGAGATGATTAAATGGGATGATATAGCTCAAGAAGGTGCTTTAGGAAGGCTATACAAAGCTGATTACTTGGATTCACAAGGGAGGACTGTTCTTGTCATGAGACCTGCTATTACGAGTGCAAGCGCCGCAGCAGGGCAGATCAAGTACCTTGTTTACTGTTTGGAGAATGCCATAATGACTTTGAGTTCTAAGCAGCAGGAACAGATGGTTTGGCTGGTTGATTTTCAAGGGTGGAACAAATCCTGCATATCATTGAAGATTACAAGGGAAACTGCTCAAATCTTGCAGGATCATTACCCTGAGAGATTGGGCCTTGCAGTCATGTACAACCCACCAAAAGTATTTGAGTCCTTTTGGACGATGGTGAAGCCATTTCTTGAGCCAAAGACTTTCAAGAAGGTGATATTCGCATATCCGGACAACACGAAAAGCCTAAGGATGATGGAAGAACTCTTTGACAAGGACAAGCTGGAATCCTACTTCGGCGGGCGAAACACCGTCGGATGGACCCTCGAGTCTTTTTCCAAAAAAATGAAAGATGATGACAATAAGAGGATGTCTAATGTCAGTGAAGGTGGTGTTTCAACAGAACTCATCAATGAATCAATTCAAATAGATGACAACAACTCGGATGATGAAACATCTAGTTGTGACACTCTTGGTTCAACCATGGGGGAAGATAAAGAAGAGATTAATGTAAAAGAAGGACTAGATTCTCCTAAACCTACAATTCTGCAAAAAGATGAATCTGGTGCAAAGCCTTGA 6804 0.3965 MGSCFEQLATEAISKLGDLIVKSTVKQFEYLICHERLVGNLRKEHKKLMGMKDALKGQVEADRSRGLVVANNVQEWLSDVEAIDAKVHKLYEDAVENKRKKCVGGRLDYSLGKQATRASQDVVSLAEQKDKLQPISYPKPALRLGPTFTQDIKGLESRKKIIGDVMEKLKDDKIRMISICGMGGVGKTTLVKGVIKVVESEKLFDKVLMAVVSQNPNYQMVQAQIADWLGLPFRSGSVQGKARELLDYLQGSSRVLIVFDDVWSELDFESIGIPSLGHEKVCKILFTSRNEEVCRKMGSKENIQLHVLPEEEAWDLFRDMAGVDTTDKANIKHIARKVAKECGGLPLAIVTTGSGLRNKAKPQWEYALEQLRHSKLQDKVQSSIELSITSLGTDEHKYCLFLSALFPEDFDVPVESVLRHAVGMRLINFAGALGKARNMVDTLVDDLKRCFLLLESGKRGCVKMHDVVRDVVLSIASPKEHGFEVRQGNDELKQLKKQDKVDHFKALSLILAAAITNGIDCPMLELFQARSEREEAILWPENFFQRMSKIRVLTMNKLRIPTMPSLFQTPVTLRTLQLEDCDVGDVSVIGNILVELEILSLSRSNIKELPTEIGQLSSLKLLDLTECNELAIISDNVFARLSQLEELYFRVRNFPWMLNKPILGELIELSQHLKVFEIQVREVEILPKDLSFKNIERFWIYVTQYWDDDRGFGYLEPNKLVFRHTNYNKSIKCSPVLMQLIKRCEVLKLEDVKDLKNVICELDDSGFQCLTKLILDSCPDVMYVVDCITATSYTAFPLLKSLSIFNLPMLKEICKASDNHHKVNNPLISEFLNLEKLYLRRLPLFTGFGNAIDSTEPPSSTDSSHRGSSCTNERVNASQTKEDESMSKSNCQNKLFSSIWMLQFPVLETITLETCHSLEEVFDLREYSKSSNTQMFPQLREIHIDSLPKLKYVWGNVPHSVDGFHNLRSIEIESCDSLSHVFTPATVKAMVNLETIDIYSCNSMVALVADEEEGDLETKGREHTIIFNKLCALSLYRLPNFENLYTDSAKLEWPSLRTFYFGYCPKLKISLIPTQLKTENRDFSNSNSSSSSHRPLIGCMPWPLTFVRHRSQETTTIMEASLAQDQEPAISEIKGKAEISHVPILEYIDLGDCDSVEEVVLLEGTHNSSIDICDYDNLEKRTSMMVTFTHLVSLELSGLPNLENFCSFAINGKQEGRDSNEGSERILREKPFINGLLVPNLTYLYMYKCDKIKILFSFSTFGRLKNLRVSDCKNIEEIVSNKKINTSEDKVMFPKLEKLSLVSLPKLKAFCQVSYSFELSSLQEVMIDDCMNMEVFSRGSCHTTKLKNVTMNSKATTYFECNISVQKEDQLNSTIEGFRKFMALQEEKMIRWSNLHDKDIIKNLFEISVMNISGYHELSMLVELKEMRMLRHVRELSITSCDSLEEVFEARGEMLTKEGYDQSINYGLESIKLQDLPKVRSIWGLNIVRHVSFTQLTSIEIARCNNLKCVMSYSVAKSLVEIKELKVKNCEMIEEIVKKEEEGKIMNMGAGCKDKTLFPKLEKLSLENLPNLRCFCYGDYDYDIPLSNENEDKKKQEQVQVSFPQLKEISLTGVPNLQCFCGGSYDYDLMLLSPSSQIETFSNGNGKVIVSTPNLHKVNNDTLTLGDMNLTLYYLHNYSGKYKVELQEVDTFECIDEKPQYKHLVGYMKRVLRLEVESCNKLLTCVPSNTIHSLLFQHLKELHVRQCQIMEVVFEGTGTGIHKSQLVRMRLHSLPKLNRIWRNNNSVIGFENLNTLIISRCHDLRFVFPNVSAARSLSNLKALDVQGCKEMEEIIGNNNSNKSVQHKGAKIIFPNLGTIRLSKLPKLNSFCSISSFYFELPHCGRIKIKECPKMETFCSATLYTPELRRLQLDEYSFLATHTLFKAVIPVWSMDLKQRLSSFRRSSIEKILTPQENQAKIDEVRKIIGPVANKFPVMCSDASIQRYLRARKNNAKKAAKMLKCSLKWRLEYKPEMIKWDDIAQEGALGRLYKADYLDSQGRTVLVMRPAITSASAAAGQIKYLVYCLENAIMTLSSKQQEQMVWLVDFQGWNKSCISLKITRETAQILQDHYPERLGLAVMYNPPKVFESFWTMVKPFLEPKTFKKVIFAYPDNTKSLRMMEELFDKDKLESYFGGRNTVGWTLESFSKKMKDDDNKRMSNVSEGGVSTELINESIQIDDNNSDDETSSCDTLGSTMGEDKEEINVKEGLDSPKPTILQKDESGAKP 2267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02258 2267 Pfam CRAL/TRIO domain 2034 2176 IPR001251 -
Aip06g02258 2267 Gene3D - 307 391 IPR042197 -
Aip06g02258 2267 PANTHER RPP4C3 1783 1913 - -
Aip06g02258 2267 PANTHER RPP4C3 1490 1661 - -
Aip06g02258 2267 PANTHER - 1490 1661 - -
Aip06g02258 2267 SUPERFAMILY L domain-like 884 1349 - -
Aip06g02258 2267 PANTHER - 1239 1352 - -
Aip06g02258 2267 PANTHER - 954 1070 - -
Aip06g02258 2267 SMART sec14_4 2024 2179 IPR001251 -
Aip06g02258 2267 Gene3D Ribonuclease Inhibitor 538 854 IPR032675 -
Aip06g02258 2267 PRINTS Disease resistance protein signature 342 356 - -
Aip06g02258 2267 PRINTS Disease resistance protein signature 249 263 - -
Aip06g02258 2267 PRINTS Disease resistance protein signature 614 630 - -
Aip06g02258 2267 PRINTS Disease resistance protein signature 176 191 - -
Aip06g02258 2267 SUPERFAMILY L domain-like 464 845 - -
Aip06g02258 2267 Gene3D - 1931 2218 IPR036865 -
Aip06g02258 2267 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 2018 2176 IPR001251 -
Aip06g02258 2267 SUPERFAMILY CRAL/TRIO domain 2026 2194 IPR036865 -
Aip06g02258 2267 PANTHER - 1783 1913 - -
Aip06g02258 2267 CDD SEC14 2035 2176 IPR001251 -
Aip06g02258 2267 SUPERFAMILY RNI-like 1683 1898 - -
Aip06g02258 2267 SUPERFAMILY CRAL/TRIO N-terminal domain 1952 2020 IPR036273 -
Aip06g02258 2267 MobiDBLite consensus disorder prediction 2217 2267 - -
Aip06g02258 2267 Gene3D Ribonuclease Inhibitor 885 1088 IPR032675 -
Aip06g02258 2267 Gene3D Ribonuclease Inhibitor 1702 1923 IPR032675 -
Aip06g02258 2267 Gene3D Ribonuclease Inhibitor 1230 1370 IPR032675 -
Aip06g02258 2267 Gene3D Ribonuclease Inhibitor 1393 1625 IPR032675 -
Aip06g02258 2267 Gene3D - 146 306 IPR027417 -
Aip06g02258 2267 PANTHER - 28 788 - -
Aip06g02258 2267 Pfam NB-ARC domain 159 378 IPR002182 GO:0043531
Aip06g02258 2267 MobiDBLite consensus disorder prediction 853 886 - -
Aip06g02258 2267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 400 IPR027417 -
Aip06g02258 2267 PANTHER RPP4C3 1239 1352 - -
Aip06g02258 2267 PANTHER RPP4C3 954 1070 - -
Aip06g02258 2267 PANTHER RPP4C3 28 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02258 Aip-Chr6 103051585 103068763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02258 174 471 WRKY Transcription Factor Family AT5G45050 27.597 6.07e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02258 - - aip:107647161 3782.65