Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02240 ATGTATCACGCGAAGAAGTTCTCGTCTGCAACGATGGTGCCGCATAAACCTCAAGGTGGTGGCGAACAAGTTGGAAATGTTGGGGTTTTGGATGGATCTGCGGTGAGGAATGCGGGACCTGCTAGTTCTGGTGGAAATGGGAAGCAGCGTTTGCGATGGACATCTGATCTTCATGATCGTTTTGTGGATGCCATTACGCAACTTGGTGGACCAGATAGAGCAACGCCAAAAGGTGTTCTGCGAGTGATGGGTGTACCTGGACTTACTATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTACTTGCCTGATTCTCCAGCTGATGGTAAAGACTCTAAAGATGAAAAAAGGACACCTGGAGACACTGTTACTGGCATAGATTCTTCTCAGGGGTTGCAAATCAATGATGCTCTAAGAATGCAGATGGAGGTTCAGAAACGTCTTCATGAACAGCTTGAGGTGCAAAAGCAGTTACAAATGAGAATCGAAGCGCAGGGGAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAATTAGGGAGTACCTTGACAAATTCAGACACATTGCCATTGTCCCACGATAAGCAAAATAATCCCCCGTCAGAGCCTTCTGGATCAAGCGATGCCATCGCAGATTCCATGTCTCCACTCAAAAAACAGAGAATCGATGATGGTTCAAAGGATGGCTTTGCTGTTTCTCAGGTGACAACAAAGACTTCACAAAAGACTGATTGTAGTGTTGATCAGTTGGACTCATGA 771 0.4475 MYHAKKFSSATMVPHKPQGGGEQVGNVGVLDGSAVRNAGPASSGGNGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPDSPADGKDSKDEKRTPGDTVTGIDSSQGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTNSDTLPLSHDKQNNPPSEPSGSSDAIADSMSPLKKQRIDDGSKDGFAVSQVTTKTSQKTDCSVDQLDS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02240 256 MobiDBLite consensus disorder prediction 187 256 - -
Aip06g02240 256 SUPERFAMILY Homeodomain-like 48 102 IPR009057 -
Aip06g02240 256 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Aip06g02240 256 MobiDBLite consensus disorder prediction 107 135 - -
Aip06g02240 256 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Aip06g02240 256 PANTHER OS05G0491500 PROTEIN 2 242 - -
Aip06g02240 256 Coils Coil 139 159 - -
Aip06g02240 256 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Aip06g02240 256 MobiDBLite consensus disorder prediction 108 125 - -
Aip06g02240 256 MobiDBLite consensus disorder prediction 1 21 - -
Aip06g02240 256 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 242 IPR044848 GO:0003700
Aip06g02240 256 Gene3D - 47 106 - -
Aip06g02240 256 MobiDBLite consensus disorder prediction 187 217 - -
Aip06g02240 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Aip06g02240 256 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02240 Aip-Chr6 101703737 101707790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02240 35 180 G2-like Transcription Factor Family AT4G28610 56.849 1.43e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip06g02240 Myb_DNA-binding 2.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02240 - - gmx:100783132 400.593