Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02233 ATGGAGCTTTTCGGAGGTGAAATCGGGAAACAAGCGTCGTGGGTCGTTGGCGTCCCACCTGTTAGGCACAGATTGAAAAAGGTTGTGCGCGTGGATTTGAACATAATGTGTCAGGAGCAGGTTGGTGCAACGGGTATATCAGTGGCATTGGCAGTCACTACATTCATAGAACACCTTGGAATGGATAGTGGGAGCGAAGGGAACTCAAACTTTTCGGGTCAATGGACTGATGGATGGAGTAGTGACTCCGACGAGGAAGAGGTCTGGAAGGGGGACGAGGGTGGCACAGTGCCTTCATCGGAGTCACTAAGTGGTTCAGGCGATCAAATAAGTGATTATGTGAAAACTTCCATGCTTTCAAACGTGGTTGCATTGGATGATGCCGAATTTCATGGGGTTGAAGAGGCTTATGCAATATATGTGGTGTATGAAAAGGCGACTGGATTTGCTATTCGAAAAAGTGATTCCATTAAAGATGATGAAGGCAATGTTGTGAGGAAATTTTTCTATTGCAATCGACACGGCTTGCGGGAGAAGAAGCATTATGAAAAGGTGGATAGGAAGAGGGCACATAAGACAGAGATTACGACCAACTGCAATGCGAAGTTCGTTGTGTTCTTAGACAAACAGAGTGGCAAGTGGAGGATGAAGACCTTTGTTCAAGATCACAATCATGATTTGGCATTGCCTGCTTTAACTAATGTCATGCTAGCCCACTGCAACATCAATGAAGGTGATAAAGCCCACATTCATAGCATGCATGAAGCAGGATTCCAAACCAGTCAGATCAAGGGGATCTTTCCATATCTGTCCGGTGGTTATCGAAACGTGCACTTCATAAAGAAGGACTTTTACAACTATATCGATGATGTACGTCACTCTCGGATCGTTCAGCGAGATGCACAGCAGCAATCATTTATCTTAAGGGGAAAACTGAGAGATGAGTCAATGAAGGAGGCTATTAGGGCAGAATTCCCTAATGCCACACATCGACTTTACACCTGGCACCTAGCGCGAAATGCTGTTTTAAATATCAAGGATAATGATTTTTGTGCTGCATTTAAGACTGTTGTGTATGGTCATTTTGAGGTGGAGGAGTTTGACCACATAGGGATTCCATGCAGCTATATCATCTTTGTTTTGAAAGAGCTAGAGAATGATGTGTTGCCGATGGGGTTGGTGTTGAAAAGGTGGTGCAAAGATGCTAAGTCTAGATCATTCCACGACTCTGATGGAGGTTTGGATCATAATAGAGCATTTCGGAGATGGTATGGTTCGTTGTGGACTGCTTGCCTCCCTATGTGTTTGTTAGCAGCCCAACAGCCTACTATGTATGAGTACGCTGCTGTAAAGATAGCGCAGCTATTAAAAGAGGTTGAAGCAGAAGTTTCAAAGGGTAACAGTTCAACTTTCAAGCAAGCTACTACAGATGGTTGCGATATTTTGGATCCAAAGATTATCAAGTCAAAAGGTGCACCGTGGTCAAGTGGCAATGGCAAAATGGGTAGGTGGTGCAGGCGCCGCCACGGTTTTGGACATGGCCGACGGAATTGCACAGCAAACAAAGACGACATATCTGATGAGCCATCAGGGTCAGGTTTGGGACAAAGTCAGCATGGCGGGAAAAGATATTGCCGTGCCAAAAAATTGTGGGGTTAG 1659 0.4497 MELFGGEIGKQASWVVGVPPVRHRLKKVVRVDLNIMCQEQVGATGISVALAVTTFIEHLGMDSGSEGNSNFSGQWTDGWSSDSDEEEVWKGDEGGTVPSSESLSGSGDQISDYVKTSMLSNVVALDDAEFHGVEEAYAIYVVYEKATGFAIRKSDSIKDDEGNVVRKFFYCNRHGLREKKHYEKVDRKRAHKTEITTNCNAKFVVFLDKQSGKWRMKTFVQDHNHDLALPALTNVMLAHCNINEGDKAHIHSMHEAGFQTSQIKGIFPYLSGGYRNVHFIKKDFYNYIDDVRHSRIVQRDAQQQSFILRGKLRDESMKEAIRAEFPNATHRLYTWHLARNAVLNIKDNDFCAAFKTVVYGHFEVEEFDHIGIPCSYIIFVLKELENDVLPMGLVLKRWCKDAKSRSFHDSDGGLDHNRAFRRWYGSLWTACLPMCLLAAQQPTMYEYAAVKIAQLLKEVEAEVSKGNSSTFKQATTDGCDILDPKIIKSKGAPWSSGNGKMGRWCRRRHGFGHGRRNCTANKDDISDEPSGSGLGQSQHGGKRYCRAKKLWG 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02233 552 PANTHER OS02G0262500 PROTEIN 127 303 - -
Aip06g02233 552 Pfam FAR1 DNA-binding domain 140 228 IPR004330 -
Aip06g02233 552 MobiDBLite consensus disorder prediction 65 79 - -
Aip06g02233 552 MobiDBLite consensus disorder prediction 516 541 - -
Aip06g02233 552 PANTHER OS02G0262500 PROTEIN 314 368 - -
Aip06g02233 552 MobiDBLite consensus disorder prediction 65 107 - -
Aip06g02233 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 314 368 IPR031052 GO:0006355
Aip06g02233 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 127 303 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02233 Aip-Chr6 101195580 101200590 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02233 FAR1 9.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02233 - - aip:107647145 642.499