Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02232 ATGGCGCTGCCACCCTTCCTTTCTCATCCATCTCTCTGTCTCTCACCAACCGTTGTCACCCTTTCCCTCTCAGCACTTTCTCTGTCTCTCACTAGCCACCGTCATGGCTCTCATCACCACTCATCAGCCTCAAAGTCACGACAGTACTGCACTGCTTCTCGCCTCTCAGTGACGACGACCATCAACAACGACAACTGCTTCTCCCCTCACGGTCACAATGAGGCCAAGGTAATCTCTGACAGGAAAAGTGGAAGATCAATAGGCTTTGGATTTGTGACTTACAACATCTCTGAAGAGGTCAGCAATGCTATTGAGTCCATAGATGGTGCGAATCATGAGCTTCCCCTGACATATGATTTCTCCAACTATATGCTTCGAAGCATGGATGATGAATTTCGTGATATTGTTGGTGTTAGGTAA 420 0.4762 MALPPFLSHPSLCLSPTVVTLSLSALSLSLTSHRHGSHHHSSASKSRQYCTASRLSVTTTINNDNCFSPHGHNEAKVISDRKSGRSIGFGFVTYNISEEVSNAIESIDGANHELPLTYDFSNYMLRSMDDEFRDIVGVR 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02232 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 110 IPR000504 GO:0003723
Aip06g02232 139 SUPERFAMILY RNA-binding domain, RBD 66 110 IPR035979 GO:0003676
Aip06g02232 139 Gene3D - 55 122 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02232 Aip-Chr6 101191658 101194186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02232 111 138 MLO family AT1G26700 67.857 2.49e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02232 - K12741 twl:120013432 61.6178