Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02208 ATGATCTCAATTAACTTGGAACAATTTGATTGTTTGCCTCTTTCACCTGTACTTAGTGGTTCCACCCTGATATTTGGATGTGCACTGCTGGATTGCTCGAAGCAATTCATTGTTGCTGAGCATGTTGAGAACTATCACTGCCACTACTGTGACACAGGCAACAAAATTGGGACCTATAGCATTACCTTGTGTACCAATTTTCACAATGTACCTTTTTATGTGGCTGCACCGCTGACTTCAATTGATCTGTCACTTTCTTTTGGAGAAGAAATCGTCATCGAGGAGAGATCTCCGAAGGAGTTGTTGAACATGCGAGGAGGACTTGGAGAGCAAGTTGCTGCCTCATGA 348 0.431 MISINLEQFDCLPLSPVLSGSTLIFGCALLDCSKQFIVAEHVENYHCHYCDTGNKIGTYSITLCTNFHNVPFYVAAPLTSIDLSLSFGEEIVIEERSPKELLNMRGGLGEQVAAS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02208 115 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 51 115 - -
Aip06g02208 115 SUPERFAMILY NagB/RpiA/CoA transferase-like 51 106 IPR037171 -
Aip06g02208 115 Pfam Initiation factor 2 subunit family 52 106 IPR000649 GO:0044237
Aip06g02208 115 Gene3D - 27 115 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02208 Aip-Chr6 100168099 100169523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02208 51 114 Eukaryotic Initiation Factors Gene Family AT2G05830 73.438 6.28e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02208 K08963 - aip:110263737 187.193