Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02206 ATGGACCACCAGTACCGCCACGTCATCAGTGCCGGAGCCAGCGATCCCATGCTCCGGACCTCCACTCTACGCACCACCACCTTCTCCTTCCCCCTAGCTCGCTACACCACCCGCCTCATCGCAGCCGACCGCCGCCGCATGCTCCTCGCCGACTGCGCTGACCGCCGATCCGACGACGGCCTCGACGCTTCCGACGATGACGATGGCGGAGGATGCGCGTACTCCAGGCCCGTCCTCGTGTTGGACTTGGTGTGGAACCTGGCTTTCGTCGTCGTGGCTGCCGGCGTGCTCCTCTCCACGCTCCGGGAGCGGCCAGCGACGCCGCTGAGGCTGTGGCTCTGTGGCTACGCGTTCGAGTGCGTGCTCCATATTTGCTTCGTGTTCTTCGAGTATCGCAGGAGAATCGGGGATCCTTCGCTGTCTCAGAGTCCGTACAGCATCCTGAAGAGGTTAGAGCCGGTGAACACTCTGGCATCATCTGTCTGGTGGGTGTTTGGATTTTATTGGATTGTTGTGGGCGGCCAAGCACTACTGGAAGATTCTCCGCAACTTTACTGGTTAACAGTGGTGTTTCTAGCCTTTGATGTATTTTTTATTATCTTTTGCATTGGGATGGCATGTATAATTTTCTTTGCCCTCTTTTGCCTTATCCCAATAATAGCATTAGCTTATGCTATAAGAATCAGGGAAGGTGCATCAGAAGAGGATATTAGGTCACTTCCTAAGTATAGGTTTGGCCAATCAAATTTGTTAGTGTTGGTTGATGACAAGAAGAAGCAAATTGTAAAAGCAGAATCGGATTCATACAATGAAAATCATATCAGTGAACTTTTTCTCGAACCAGATGATTCTGAATGCTGCATCTGCCTATCCCCCTATGTTGATGGAGCAGAACTGTATCGCCTCCCCTGTACCCATCATTTCCACTGTGGATGCATCAGCCGCTGGCTCCGGACAAAAGCAACTTGCCCGCTCTGCAAATTCAATATCCTTAGAGGCGATACTAAGGTGCCTTCTTCTCTTTGGAGCCTCAGAGACATTCTTGAGGTGAACTTGTCTGACAATGCTTTAATTCTGTCTCTTCCAATTGAAATTGGGAACTTAAAGGTTGTGACTTTCTTGGATCTATCAAAGAATATGATCTCAGGAAGCATTCCTGGGGCCATTTCTAGATTGCAAAATTTGCAAATTTTCAACTTATCACAAAATAAATTGGTAGGGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGTAGGGGCAGTTTTGGCTCTATGTTCAAAGGTTTACTTTCAAATGGGATGCTGGTTGCTGTCAAAGTGTTTAACTTGGACTTAGAATTAGGATCAAAGAACTTCAGTGTAGAATGCGAAGCAATGCTCAATCTGCGCCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAATCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAAATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTTATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGGCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTGGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTCACGAGCAATTGATCAAGTTGTGGATTCTAACTTTTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACCGGCCTTAAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGACAGATATTGCTGCATCACTAAACAAAGTTAAGGCCAAGTTTTTTGAAGCTAGTGATAAGAATGTGGTTCGAACGCAGAGAAGAGAACTCGAAGGCAGCTTGGAGGAAGCCCCGAAGCAGCCCTCTCTCGTCGCCGTTCCTCAAAGTCCAGCCACCGCCACCATCCGCATTGCTACAGCTTCGGCGCAACATCACCCTTGTTCGCCGCGCATCCGCCTCTTTTTTGGCCAAGCTTCTGCCTCTGTTTTTTGGCCAACCCTTGTTCTGCCCTTTTTGGCCAACCCTTGTTCGAGCTGCTTAGCCCTCTGTTCAGTCCTCTACGCCGCGTGTTCGAGCCTCTGTTCCGCCGCCTTTCAGCCACCGTTCAGCCATTGTTCAGTCTCCGTTCAACCATTTCCGTCGTATTTTAAAGCTCCTCCCTCTCCTGTACTGTTTGAATTTCAGAACTTCTCCATCCTAGGGTGA 2499 0.467 MDHQYRHVISAGASDPMLRTSTLRTTTFSFPLARYTTRLIAADRRRMLLADCADRRSDDGLDASDDDDGGGCAYSRPVLVLDLVWNLAFVVVAAGVLLSTLRERPATPLRLWLCGYAFECVLHICFVFFEYRRRIGDPSLSQSPYSILKRLEPVNTLASSVWWVFGFYWIVVGGQALLEDSPQLYWLTVVFLAFDVFFIIFCIGMACIIFFALFCLIPIIALAYAIRIREGASEEDIRSLPKYRFGQSNLLVLVDDKKKQIVKAESDSYNENHISELFLEPDDSECCICLSPYVDGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRGDTKVPSSLWSLRDILEVNLSDNALILSLPIEIGNLKVVTFLDLSKNMISGSIPGAISRLQNLQIFNLSQNKLVGATNGFDESNLLGRGSFGSMFKGLLSNGMLVAVKVFNLDLELGSKNFSVECEAMLNLRHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMINVASALEYLHHGSSPIVVYCDVKPCNVLLDEDMVGHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDVYSLGIMLMETFTRKKPTDDLFVAGLSMKGWISESLSRAIDQVVDSNFLQDEGHHHVDDIIASTSSILKPALNCCEDLPEERMNMTDIAASLNKVKAKFFEASDKNVVRTQRRELEGSLEEAPKQPSLVAVPQSPATATIRIATASAQHHPCSPRIRLFFGQASASVFWPTLVLPFLANPCSSCLALCSVLYAACSSLCSAAFQPPFSHCSVSVQPFPSYFKAPPSPVLFEFQNFSILG 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02206 832 Pfam Protein kinase domain 413 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02206 832 Pfam Ring finger domain 285 327 IPR001841 -
Aip06g02206 832 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Aip06g02206 832 SUPERFAMILY RING/U-box 278 332 - -
Aip06g02206 832 ProSiteProfiles Protein kinase domain profile. 412 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02206 832 SMART ring_2 286 326 IPR001841 -
Aip06g02206 832 CDD RING-H2_RNF111_like 285 329 - -
Aip06g02206 832 SMART serkin_6 412 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02206 832 Gene3D Ribonuclease Inhibitor 327 420 IPR032675 -
Aip06g02206 832 Gene3D Transferase(Phosphotransferase) domain 1 489 708 - -
Aip06g02206 832 SUPERFAMILY L domain-like 337 410 - -
Aip06g02206 832 SUPERFAMILY Protein kinase-like (PK-like) 393 685 IPR011009 -
Aip06g02206 832 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 326 IPR013083 -
Aip06g02206 832 PANTHER RECEPTOR-LIKE PROTEIN 55 407 693 - -
Aip06g02206 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Aip06g02206 832 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 407 693 - -
Aip06g02206 832 PANTHER RECEPTOR-LIKE PROTEIN 55 335 407 - -
Aip06g02206 832 Gene3D Phosphorylase Kinase; domain 1 421 488 - -
Aip06g02206 832 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 335 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02206 Aip-Chr6 100052497 100060060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02206 13 336 C3H Transcription Factor Family AT1G68070 43.931 3.41e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip06g02206 Pkinase 6.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02206 - - ahf:112696795 629.787