Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02196 ATGCTGGCCTTTAAGCCTAAAGATCGGCCTTCTACTGAAGAGGCGTTAGCGGATCCATATTTTAAAGGCTCGGCCAAGGTTGAGAGAGAACCTTCTGCCCAACCAGTTACAAAGATGGAATTTGAGTTTGAGAGACGCAGGATAACAAAGGAAGATGTACAAGAACCTATATACCATGAGATTCTAGAGTATTATCCAAAAATGTTAAAAGAATTTCTAAAGGGAGCAGAGCCAACAGGTTTCATGTATCCTAGTGCTCTGGACCACTTCAAGAAACAATTTACATATCTTGAGGAGCATTACAACAAAGGTGGAACTGTTATTCCACCGGAGAGGCAACATGCATCTTTACCTAGAAAATCCCTTGGAATTGAAAAAAGGCAAATAAATAGAAAGAAAGTATCCAAACTTGGGAATCTATCATTATCGAAAAGAATTTTGGTGGTTGATGATAATGCAGGGAATAGAAAAGTTGCAAAAGGTGTTTTACAGAAATATGGGGCAACAGTTACTTATGTTGAGGGTGGCAGGGCTGCTCTTCAGATGCTTAAGCCACTGCACAATTTCGATGCAGGTTTCATGGATCTCCAAATGCCAGAAATGGATGGGTAA 612 0.402 MLAFKPKDRPSTEEALADPYFKGSAKVEREPSAQPVTKMEFEFERRRITKEDVQEPIYHEILEYYPKMLKEFLKGAEPTGFMYPSALDHFKKQFTYLEEHYNKGGTVIPPERQHASLPRKSLGIEKRQINRKKVSKLGNLSLSKRILVVDDNAGNRKVAKGVLQKYGATVTYVEGGRAALQMLKPLHNFDAGFMDLQMPEMDG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02196 203 MobiDBLite consensus disorder prediction 1 35 - -
Aip06g02196 203 Gene3D Transferase(Phosphotransferase) domain 1 1 44 - -
Aip06g02196 203 SUPERFAMILY CheY-like 144 203 IPR011006 -
Aip06g02196 203 Pfam Response regulator receiver domain 146 203 IPR001789 GO:0000160
Aip06g02196 203 MobiDBLite consensus disorder prediction 1 15 - -
Aip06g02196 203 CDD REC_hyHK_CKI1_RcsC-like 146 203 - -
Aip06g02196 203 Gene3D - 124 203 - -
Aip06g02196 203 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 117 - -
Aip06g02196 203 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 117 - -
Aip06g02196 203 Gene3D Phosphorylase Kinase; domain 1 45 66 - -
Aip06g02196 203 ProSiteProfiles Response regulatory domain profile. 145 203 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02196 Aip-Chr6 99584609 99585981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02196 1 122 MAP Kinase Gene Family AT5G19010 76.423 1.16e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip06g02196 Response_reg 1e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02196 - K04371 gmx:100814013 221.476