Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02187 ATGCCGGCGCCCTTCTCCAACGCTGTCCGGGAGAACATGAGCAACCCCGTCGAGGTAAGCACCACAAATGGTCAGTCGTGGAGCATCTCCTGGGTTGTCGAGGAGGAGCATCCGCATCGAATCGTCTTCACCGGAGGGTGGCGAGCCTTTTACGAACACTACCGTCTTCGAATCGGAAACACAACGCTATTTTCGTATCACCAACCAAAGTTTTTCTACGTGGCCATCCATGACGCAAGATACTGCGAGATCAACTATGGAAGAAACTTGCGTAATGGAAGTCTTCCAGCAATCCCCGCACATGGCAACTATACAGTCCAGTTCTTCGCGATAATCCCGGTGAACGACCCTGATACACTGATGCTCCCGCTACGGTTCTCGCGGGATTATGGCCGGTCCCTACCGCGACCCCTGACCCTAACCACGCCTACAGGACATCATCATCGCGTGGGCTGGAATATGGAACCTAATGGAAGGATCGTGCTTGATGGAGGATGGGACGCTGTCCGAGAACACTACGGCCTAAGTGATCAGTGGCTGGTGCTGTTCCGTTATCATGAAGCTCAAAACACCATGTATGTCATTTTCTTCAACGGTCATACAATGGAAATCAACTACTTGGCCCATGCCGAGCCGGGGATGGACTCCACTTGTATAAGCTACCCGACGGCCCCCAAGTCAAGGCACATAGCCGATGGGTTCAGATCGACCAATCCCTTCTTTCCGAATGTCCCCCCTCTGCCGGGAGTATACGAGGATAGCCCAATTTCGATTACCAACGAGAGGGGCGTGGACCATTCAGTATACGCACTATGTCGGGAGGACGAATGGATGTTTTGGAATGGGCTAGAGTGCCTTAGCAACAGCATGTCAACTAAGACACGGCCATGTGTGTGTCTTCGAGCGGCTGGCACCGCAGGACTACCAGCTGCATATATATTGAGAACTCCTGTATCCTAA 960 0.526 MPAPFSNAVRENMSNPVEVSTTNGQSWSISWVVEEEHPHRIVFTGGWRAFYEHYRLRIGNTTLFSYHQPKFFYVAIHDARYCEINYGRNLRNGSLPAIPAHGNYTVQFFAIIPVNDPDTLMLPLRFSRDYGRSLPRPLTLTTPTGHHHRVGWNMEPNGRIVLDGGWDAVREHYGLSDQWLVLFRYHEAQNTMYVIFFNGHTMEINYLAHAEPGMDSTCISYPTAPKSRHIADGFRSTNPFFPNVPPLPGVYEDSPISITNERGVDHSVYALCREDEWMFWNGLECLSNSMSTKTRPCVCLRAAGTAGLPAAYILRTPVS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02187 319 Gene3D - 103 200 IPR015300 -
Aip06g02187 319 Gene3D - 1 82 IPR015300 -
Aip06g02187 319 PANTHER B3 DOMAIN-CONTAINING 101 209 - -
Aip06g02187 319 PANTHER B3 DOMAIN-CONTAINING 2 87 - -
Aip06g02187 319 ProSiteProfiles B3 DNA-binding domain profile. 105 200 IPR003340 GO:0003677
Aip06g02187 319 SUPERFAMILY DNA-binding pseudobarrel domain 111 198 IPR015300 -
Aip06g02187 319 ProSiteProfiles B3 DNA-binding domain profile. 1 80 IPR003340 GO:0003677
Aip06g02187 319 SUPERFAMILY DNA-binding pseudobarrel domain 1 86 IPR015300 -
Aip06g02187 319 CDD B3_DNA 118 198 IPR003340 GO:0003677
Aip06g02187 319 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 101 209 - -
Aip06g02187 319 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02187 Aip-Chr6 99112568 99113846 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02187 120 202 REM Transcription Factor Family AT4G33280 28.916 1.43e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02187 - - ahf:112746889 455.292