Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02186 ATGCACACAAACAGCCTCACCTTTGACGACGTCGGTTGTCTTCGGCAGTTGATGGCTTCGCCGTCTCCATCAATGGAAAGAAGGACTACAATTTTCTTTGGAGGACATCCCCCAATTTTGTGTGTTTCGCTAAATTACTGCATTGTTGCTGTTTGGCAGAGGGTTGCCGGGGATGAAGATACCACTGGGGGCGTGCACGTCGCCGATGAACCAGAAATGTCTGACGGAGCAGAGCATGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCACGGATGGAGTCGGACAATTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAAGATGTTTTCCGGTTTAATTTCACAGACGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTTGGGGCGAGACGTTCCAGAAGCGGAAAACGTGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGTTGTGGATGTCCTGCAAGGATGCTACTCTGCATGGACGATGAATCAGGACGTTGGCTCGTTGCGTACTTTTTAGACACGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTTCCAGGCCATCGGAAGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTAGCCGGCGGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGATGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAATGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATTACCACAACCAAACAGTTGTCTTTGTCGCCGCACTGGTGGCAGATGAGAAAGAAGAGACCTATATCTGGCTGCTTCAACAATTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGATAGGAAAATGAAGTCTGTGATCGAGCAAGTTTTTCCGGAGGCTCACCATCGACTCTGTGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGCTTAGGGATTGCATGCTTGGCGACTACGAGGTCCGAACATTCGAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAAGATGGGTACATGACATGTACGAGAGAAGGCAGAGTTGGGCCACAGCACACATACGGGGAAAGTTCTTTGCCGGATTTCGAACAACGTCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTAAGTTTTTACGTCATTTCCAACGATGCTTGATGTTCGTGCGTGCAAAGGAGGTGGAGGTTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTCGAGCGGAGTGCAGCCGAGAACTACACTCGTGCAATATTCTATTTGTTTGTTCCCATTCTTGACAAGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCGTCTCTCGATACGGCACTCCGGGGAAGGATTGGCGTGTTGTTGCAACGTTTGATACGAGGCAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTGCCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTGCAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACTGAAAAGTTCCAGTTTGCAAGAGACACTGCCATGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGGACACCAGTTTTCCACCCGAGGGGCCACCTACTGAGGGTGGCAGGGGCCCGGCGCGGAATCCACCCAGGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAGAAAACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACGACGTGTCCGGGCCGCCGCACAATGGAGTCATCCAGCGCAGTTGCAGATGACATGGATTTGATGGACACTGACATGCTATATGATAACCTATCCGGCGATCTGTATGCGACAGCCGAGATTTCTTCGTTCGAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCGACTTCGCTGGGACCAACACGTCCGGGCCTGTCATGTCTCTCGCCGATTGGGCAAAGGGGGGCTACAGTCGTCACGATGGTGTGTTGCGTCACGATGGTGTGTTGCAACGTGGATATTCAGATGGACGTCTCCTAAAAAAACTCCCTTCGTCCGCCTCTTTGCAGCAGACATTCGGAACTGGTTACGTCTCGTACTACCTTGTGTGCTAG 2682 0.5097 MHTNSLTFDDVGCLRQLMASPSPSMERRTTIFFGGHPPILCVSLNYCIVAVWQRVAGDEDTTGGVHVADEPEMSDGAEHGVGSFEGEGSARMESDNLDGAGGMSDNYAEDEFYAVDSVESIGWIDFLNLSEEDVFRFNFTDVDIAFEFYQQYAKHHGFGARRSRSGKRGEVRIRQEFVCHRQGYRSPKFYSMPNRQKRPRAETRCGCPARMLLCMDDESGRWLVAYFLDTHNHHVLELRFSSMLPGHRKMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYLRECKTNDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLSPLVVFSGVNYHNQTVVFVAALVADEKEETYIWLLQQLQTSMKGKAPVSIITDGDRKMKSVIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMLRDCMLGDYEVRTFERKWFEMVEKFGVADKRWVHDMYERRQSWATAHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTKFLRHFQRCLMFVRAKEVEVDFECAKGDPVMTTNLKQLERSAAENYTRAIFYLFVPILDKACAMRVVDSEDNGSYFIHTVSRYGTPGKDWRVVATFDTRQVRCTCMRMECFGVPCEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVQSMGVIWDSVQLTQHWCLMDWYRKVCKIACHSTEKFQFARDTAMLMLKHFENEDAGDTSFPPEGPPTEGGRGPARNPPRRNTKGNGAHGGKKTQRCRLCREVGHNRTTCPGRRTMESSSAVADDMDLMDTDMLYDNLSGDLYATAEISSFECSDSDTQAGFANSDFAGTNTSGPVMSLADWAKGGYSRHDGVLRHDGVLQRGYSDGRLLKKLPSSASLQQTFGTGYVSYYLVC 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02186 893 PANTHER OS02G0262500 PROTEIN 282 696 - -
Aip06g02186 893 MobiDBLite consensus disorder prediction 714 754 - -
Aip06g02186 893 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 136 278 IPR031052 GO:0006355
Aip06g02186 893 PANTHER OS02G0262500 PROTEIN 136 278 - -
Aip06g02186 893 MobiDBLite consensus disorder prediction 69 101 - -
Aip06g02186 893 Pfam FAR1 DNA-binding domain 147 236 IPR004330 -
Aip06g02186 893 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 282 696 IPR031052 GO:0006355
Aip06g02186 893 SUPERFAMILY Retrovirus zinc finger-like domains 741 776 IPR036875 GO:0003676|GO:0008270
Aip06g02186 893 Pfam MULE transposase domain 325 419 IPR018289 -
Aip06g02186 893 ProSiteProfiles Zinc finger SWIM-type profile. 602 638 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02186 Aip-Chr6 99108567 99111974 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02186 MULE 7.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02186 - - aip:107647116 1813.89