Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02177 ATGGCAGAAAGATTATCTCTTGGCAATGTTGAGGACAGAAAGCTCAAAAGCAAGATGGAGGATTCTCCCACCCAAGACCGTCCAGAGTCAGAGAATCCAACATTGTCTTTGATGATGATGGAGGAGTCACCTACCATGAACGGTCTAGATCCAGAGAATCTAACATTGTCTTTGACGACTAAGATGGAGGATTCACCCATCATGGACAGTTTACAGCCAGAGAATCTAACACTGTCTTTGGCGACTAAGATGGAAGATTCACCCACCATGGAGGGTGTAGGGTCAGACAATCTAATGTTGTCTTTGACTCTAGCTACCAGAACCATGGTAGATGAATCTCATTCTAAAGCCACGTCAACTTCTAATAAACCCTCGAAAGATCCAGAGGGTTCAGGATCAAATACTCTCCAAAATCATATAGATACCTCTGATGACAAGGAAGATTCACCTTTCCCTTGTGGATTTTGCAATAGAAGGTTCAGTAGTTCCCAAGCCCTAGGGGGACACCAAAACGCACACAGGAGAGAGCGTTCTCCCTTAAATAAAAGAAAGAAAACAAACGAACCAGAAGAGATGGATGAAGCAGATCTATTTGCCAACCGTGCTCTTGGTAGTTTTCTTAGTTCAAACTATTCTTCATTCTCCACCACCGTACCAAGCCTTCGATTCCAAGGCTTATCACCACCCTCATCAACCCTATCTCCCCACCCATACCATCATGGTGGCAGCACGATGACCAGGAGTCACATGACTAGTCACGTGTCATCCTTACCATCTTGGCCGCGCCCTGGTTCAATAGGTAGTCGGGCTTTTGGAGGCTATGGCCCTTCGTATGGGACGCAACCTTTCCCCAAAGCATCGTCCCTATTGTCGCCGCAACATCGGTTTGGGACGAATAACTCTTGGAGAGAGGAACATACGGGTATTCTGGAGAGACTCAACCACAACAAGCACGTCGGACTTCTCAATGAACTCAGCCGCATTCCTTCAGTTCCTGAGGCTGCCACCCGGATCGGCCGTCATCAACCTCATGTGGAGTTTGGTGACAGCCAAGGTGGCAGCAGCCGCCTTCGTCTTGATGGTGGTAGCAATGCTGGGGGAAATAATAATAATAATAATAATGACCACCACCACGAAGAAGATGGAAATCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNTTTGATTTTAGTCCCTCACTGTTATTCACCGTCTCGCTCTCTCAATCTCCCTCTCAACCTCACTTAGCCTTACTTTCTCATTCTCACAGTCACAAAAGAACCACCAGCCTCCACCGCCGCACAGTTGCTGCGATGATCATCGGCTCCTCTGTTTCATCTCTGTCACTGCATCGTCACCTCCAAAAGTCCTGTGCATGTGTCATGTATTGTCATCGTAGATGTTGTTCTCTCTTATTATCGTCGGCTCGTCTGCGTCCGTTGGTTCCTGCGCCTTCGGCTTCACTACTGTTGCATTGTCTGTACCTCTGTTCACATCACATCATCCCTGCGCTTCACTTTGTCCACCATGCTATGAAATGTGAAGCCTTGTCTTCCCTTGTTTTCCAGGGCTTGATAGACCTGTTACGCAGCTGTCAAAAGATTCGACGATGA 1611 0.4668 MAERLSLGNVEDRKLKSKMEDSPTQDRPESENPTLSLMMMEESPTMNGLDPENLTLSLTTKMEDSPIMDSLQPENLTLSLATKMEDSPTMEGVGSDNLMLSLTLATRTMVDESHSKATSTSNKPSKDPEGSGSNTLQNHIDTSDDKEDSPFPCGFCNRRFSSSQALGGHQNAHRRERSPLNKRKKTNEPEEMDEADLFANRALGSFLSSNYSSFSTTVPSLRFQGLSPPSSTLSPHPYHHGGSTMTRSHMTSHVSSLPSWPRPGSIGSRAFGGYGPSYGTQPFPKASSLLSPQHRFGTNNSWREEHTGILERLNHNKHVGLLNELSRIPSVPEAATRIGRHQPHVEFGDSQGGSSRLRLDGGSNAGGNNNNNNNDHHHEEDGNPXXXXXXXXXFDFSPSLLFTVSLSQSPSQPHLALLSHSHSHKRTTSLHRRTVAAMIIGSSVSSLSLHRHLQKSCACVMYCHRRCCSLLLSSARLRPLVPAPSASLLLHCLYLCSHHIIPALHFVHHAMKCEALSSLVFQGLIDLLRSCQKIRR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02177 536 PANTHER OS07G0593000 PROTEIN 88 260 - -
Aip06g02177 536 MobiDBLite consensus disorder prediction 1 37 - -
Aip06g02177 536 MobiDBLite consensus disorder prediction 333 390 - -
Aip06g02177 536 MobiDBLite consensus disorder prediction 109 195 - -
Aip06g02177 536 MobiDBLite consensus disorder prediction 170 195 - -
Aip06g02177 536 PANTHER ZINC FINGER PROTEIN JAGGED 88 260 IPR045320 GO:0003700
Aip06g02177 536 SUPERFAMILY beta-beta-alpha zinc fingers 148 178 IPR036236 -
Aip06g02177 536 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
Aip06g02177 536 MobiDBLite consensus disorder prediction 109 139 - -
Aip06g02177 536 MobiDBLite consensus disorder prediction 226 261 - -
Aip06g02177 536 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 178 IPR013087 -
Aip06g02177 536 MobiDBLite consensus disorder prediction 1 27 - -
Aip06g02177 536 MobiDBLite consensus disorder prediction 356 372 - -
Aip06g02177 536 Gene3D Classic Zinc Finger 131 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02177 Aip-Chr6 97920501 97928088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02177 54 183 C2H2 Transcription Factor Family AT5G10970 34.074 1.47e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02177 - - ahf:112757344 723.391