Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02162 ATGGAAGTAAACAACAACAACAATGGTGGATGTTGTTGTGGAAGTCTTTTTCAGAGGTGCAAGCCTTACATAGCAATGATATCTCTGCAATTTGGGTATGCCGGAATGAACATAATCACAAAGGTTTCTCTCAACCGCGGCATGAGCCACTATGTTCTTGTTGTCTATAGACATGCCTTTGCTACTGCTGCTATTGCTCCCTTTGCTCTTGTTCTTGAGAGGAAAGTGAGGCCTAAGATCACATTCCTTATGTTCATGCAAATGTTTGTGTTGGGTCTTCTTGGGCCTGTGATTGATCAGAACTTATACTACATGGGTTTGAAATTTACATCCCCAACGTACTCGTGTGCTCTAAGCAACATGCTCCCTGCAATGACGTTTGTGATGGCAGTTATTTTCAGGATGGAGAAGTTGGACATGAGAAAAGTGAGGTGCCAAGCTAAGGTGATTGGAACAGTGGTAACAGTAGTTGGGGCAATGTTAATGACATTGTACAAAGGCCAAGTCATTAACTTCTTCTGGTCTCATTACATGCACCACCCAAGAAACTATGTACCTGATAACACCACCACTAACTCTGGTGAAACCGATTGGGTCAAGGGTTCCATTCTTCTCATCTTTGCTACCCTTGCTTGGGCTTCCTTCTTCATCCTTCAGGCAGTGACATTAAGAAAATACCCAGCTCAGCTCTCACTAACTGCCATAGTGTGCTTCTTGGGAACACTGCAATCAATTGCAGTAACCTTTGTGATGGAGCACAGTCCAAATGTTTGGACCATTGGCTGGGACATGAACTTGCTAGCTGCAGCCTATGCTGGGATAGTGTCATCAGGTATTGCATACTATGTTCAAGGGATTGTGATGCAAAGAAGAGGACCAGTTTTTGTCACTGCTTTCAGCCCTTTGATGATGATCATTGTTGCTGTTATGGGATCTTTCATCCTTGCTGAAAACATATACCTTGGAGGTGTAATTGGAGCAATTCTTATAGTAGTGGGACTCTACTCGGTTCTATGGGGAAAATACAAGGAGCACAAAGAGAAAGAAGCAGAAAATATAATCACTGATGAACCAATTAAGTGCTGTGGTAACCAAATTGCAAGGTTGGAAACTGTGATTGAAGATTCAGAATCAAATGACATTGAGATGCAAAAGGGTGATGATAATAATAATAACGAAGCTTGCAACGAACTAAGCGTGACAATTATTAGTAACAATAATAATAATAATGATAATGATGTTACAAAAGCTTGA 1254 0.4123 MEVNNNNNGGCCCGSLFQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQMFVLGLLGPVIDQNLYYMGLKFTSPTYSCALSNMLPAMTFVMAVIFRMEKLDMRKVRCQAKVIGTVVTVVGAMLMTLYKGQVINFFWSHYMHHPRNYVPDNTTTNSGETDWVKGSILLIFATLAWASFFILQAVTLRKYPAQLSLTAIVCFLGTLQSIAVTFVMEHSPNVWTIGWDMNLLAAAYAGIVSSGIAYYVQGIVMQRRGPVFVTAFSPLMMIIVAVMGSFILAENIYLGGVIGAILIVVGLYSVLWGKYKEHKEKEAENIITDEPIKCCGNQIARLETVIEDSESNDIEMQKGDDNNNNEACNELSVTIISNNNNNNDNDVTKA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02162 417 Pfam EamA-like transporter family 23 163 IPR000620 GO:0016020|GO:0016021
Aip06g02162 417 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020|GO:0016021
Aip06g02162 417 PANTHER WAT1-RELATED PROTEIN 16 370 - -
Aip06g02162 417 PANTHER WAT1-RELATED PROTEIN 16 370 IPR030184 GO:0016021|GO:0022857
Aip06g02162 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Aip06g02162 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02162 Aip-Chr6 96585680 96590100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02162 13 391 Nodulin-like Gene Family AT5G07050 63.896 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02162 - - gmx:100811617 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02162 06 96585680 96590100 Aip06g02162 06 96585680 96590100 ECH