Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02090 ATGGTCTGCCGTCAAGGAATCCAACACCACCGTTCCCTCTGCCTGATCGCGACACTTCTCTTCGTCCCACTCTTGGACTACAAAAGGACTCCATACCAAACTCAGGAGAGTAAGCTTAGGAGAGGTGTTGATATTGTTGTTGGCACTCCAGGTCGCATGAAGGATCATATAGAAAGGAAAAATATTGACCTGAGCCAGCTAAAGTTCCGTGTCCTTGATGAGGCTAATGAGATGCTCAGAATGGGTTTTGTTGAAGATGTGGAACTAATTCTAGGCAAGGTACAAGATGTTAGCAAAATTCAGACACTTCTTTTCAGTGTTACTTTGCCAGACTGGGTTAAGCATGCATGTTTTGTCATCATCCTATGTTTCAGTGTTACTTTGCTAGCCATTTTTTGGTTACAAATTAAGCACACTATACAAAACAAGCTTCACCGAAATGGTATCCCTGAAGATTTGGTTGCAACAAAAGCTATACTTGCTAAAATCACAAAGAACCCAGGAGAATATAATCAAGCATTTGTGGAGCAATTCAAGATATTTCATCAAGAACTCAAGGACTTCTTTAATGCTGGCAGGTTTATCTTGAATTCTCAGTATCACTTGTAA 609 0.4056 MVCRQGIQHHRSLCLIATLLFVPLLDYKRTPYQTQESKLRRGVDIVVGTPGRMKDHIERKNIDLSQLKFRVLDEANEMLRMGFVEDVELILGKVQDVSKIQTLLFSVTLPDWVKHACFVIILCFSVTLLAIFWLQIKHTIQNKLHRNGIPEDLVATKAILAKITKNPGEYNQAFVEQFKIFHQELKDFFNAGRFILNSQYHL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02090 202 Gene3D - 3 122 IPR027417 -
Aip06g02090 202 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 127 IPR014001 -
Aip06g02090 202 PANTHER DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21 29 116 - -
Aip06g02090 202 Pfam DEAD/DEAH box helicase 26 114 IPR011545 GO:0003676|GO:0005524
Aip06g02090 202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 117 IPR027417 -
Aip06g02090 202 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 29 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02090 Aip-Chr6 92039209 92041810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02090 39 110 Eukaryotic Initiation Factors Gene Family AT1G72730 43.056 8.50e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02090 K16911 - gmx:100820207 149.443