Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02081 ATGGCCTACTATGGTGTTTTGAGGTTTGTTATGGAAAATGGCGCCAAGGGATGCGAGGTCATCATTAGTGGCAAGTTGAGGGCTCAGCGCGCTAAATCCATGAAGTTCAAGGACGGGTACATGATTTTCTCAGGTGGCATAGCTGTGGGGGCTATCATTGGAATTATATTGGCTGGAGCACTTGTTATTGTCATGGCGTTTGGGTATTTTCCAAATGGCATAGCAATAGCAGTTAAACAGCTTTCTTTTAGGTCGAAGCAGGGGAATTGTGAGTTCACAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCGTGCCTAGTTAAGCTCTATGGCTGTTTTATGGAGGGAGATCAAATGTTGTTGATATATGAATATATGGAAAACAACAACCTTGCCAGTGCTCTGTGGGACAAAGAGAAAACTCAATTGAAATTGGACTGGTCAACAAGGCGCAAGATTTGTATAGGCGTTGCTAAAGGCTTGGCTTACCTCCTTGGAGAGTCAAGATTAAAAATAGTTGATTAG 528 0.428 MAYYGVLRFVMENGAKGCEVIISGKLRAQRAKSMKFKDGYMIFSGGIAVGAIIGIILAGALVIVMAFGYFPNGIAIAVKQLSFRSKQGNCEFTNEIGMISALQHPCLVKLYGCFMEGDQMLLIYEYMENNNLASALWDKEKTQLKLDWSTRRKICIGVAKGLAYLLGESRLKIVD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02081 175 Gene3D - 1 52 IPR036419 -
Aip06g02081 175 SUPERFAMILY Protein kinase-like (PK-like) 57 165 IPR011009 -
Aip06g02081 175 Gene3D Transferase(Phosphotransferase) domain 1 55 174 - -
Aip06g02081 175 ProSiteProfiles Protein kinase domain profile. 47 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02081 175 Pfam Ribosomal protein S3, C-terminal domain 2 43 IPR001351 GO:0003735|GO:0006412
Aip06g02081 175 Pfam Protein tyrosine and serine/threonine kinase 72 166 IPR001245 GO:0004672|GO:0006468
Aip06g02081 175 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 68 174 - -
Aip06g02081 175 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 68 174 - -
Aip06g02081 175 SUPERFAMILY Ribosomal protein S3 C-terminal domain 2 46 IPR036419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02081 Aip-Chr6 91010733 91012527 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02081 68 174 Receptor kinase-like Gene Family AT1G53430 71.028 3.24e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip06g02081 PK_Tyr_Ser-Thr 1.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02081 - - gmx:100786496 169.474