Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02049 ATGGAAAACATGCCACCAGGTTATCGTTTCTACCCTACGGAAGAGGAGCTGATTTCATTCTATCTACGGAACAAGCTTGAAGGAGTGAGGGAGGACATGAATCGGGTTATTCCAGTTCTTGATATATATGAATATAGTCCAAGCCAACTCCCACAAATATCGGGAGAGGCAAGTGTTAGAGACAGCGAGCAGTGGTTCTTTTTCATTCCGCGGCAAGAAAGCGAAGCGCTGGAANNNNNNNNNNNNTCGGAATGA 255 0.4353 MENMPPGYRFYPTEEELISFYLRNKLEGVREDMNRVIPVLDIYEYSPSQLPQISGEASVRDSEQWFFFIPRQESEALEXXXXSE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02049 84 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 76 - -
Aip06g02049 84 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 76 - -
Aip06g02049 84 ProSiteProfiles NAC domain profile. 4 84 IPR003441 GO:0003677|GO:0006355
Aip06g02049 84 SUPERFAMILY NAC domain 2 73 IPR036093 GO:0003677|GO:0006355
Aip06g02049 84 Pfam No apical meristem (NAM) protein 5 73 IPR003441 GO:0003677|GO:0006355
Aip06g02049 84 Gene3D NAC domain 13 81 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02049 Aip-Chr6 89248434 89248774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02049 7 76 NAC Transcription Factor Family AT5G22380 66.197 1.32e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip06g02049 NAM 7.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02049 - - adu:107494022 150.984