Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02035 ATGGTGGCAAAATCGATGGAATTCTCTTATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTCTGATAACAAAATTGGTCAGGAAGATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTGAAGGTCTTAAAACATGTTCATCACTTGAATTTGGTGCATTTGATTGGATATTGCGTCGAAGGATCTCTCTCCTTGTGTATGAATACATTGAAAATGAAAACTTAGGCCAATATTTGCATGGTACAGGGAGAGAACCTTTGGCATGGTCAACAAGGGTGCAAATTGCTCTGGATTCAGCAAGAGGAATTGAATATATACATGAACACACTGTTCCTGTTTATATCCACCGTGATGTGAAACCTGCTAACATATTAATATATAAAGACTTCCGTGAAAAGGTTGCAAATTTTGGGCTAACTAAACTTTGGGAAGTTGGAAGCTCTTTATCACTTCATACTCGTCTTGTGAGAACATTTGGATACATGCCTCCAGTATACTTCTGGCAATCAAATCAGAAGAAAACAAGCTACAAGAAGTCATGGTTGGATTAG 558 0.3799 MVAKSMEFSYQELAKATNNFSSDNKIGQEDGCSSINRVSFRVEGLKTCSSLEFGAFDWILRRRISLLVYEYIENENLGQYLHGTGREPLAWSTRVQIALDSARGIEYIHEHTVPVYIHRDVKPANILIYKDFREKVANFGLTKLWEVGSSLSLHTRLVRTFGYMPPVYFWQSNQKKTSYKKSWLD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02035 185 Pfam Protein kinase domain 65 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02035 185 PANTHER - 2 28 - -
Aip06g02035 185 PANTHER - 65 169 - -
Aip06g02035 185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Aip06g02035 185 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 28 - -
Aip06g02035 185 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 65 169 - -
Aip06g02035 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02035 185 SUPERFAMILY Protein kinase-like (PK-like) 56 173 IPR011009 -
Aip06g02035 185 Gene3D Transferase(Phosphotransferase) domain 1 35 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02035 Aip-Chr6 88156728 88158248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02035 2 166 Receptor kinase-like Gene Family AT3G21630 52.973 1.63e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip06g02035 Pkinase 2.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02035 - K13429 ccaj:109796409 204.142