Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02014 ATGAACATGGACGAGTTTCTTAGTAGCATATGGAATGCAGAAGAGAACCAAGCCATAGTAAACTCTTCTAACAACATCACCAATAATAACAATAATAACACACCAGTAGGTGAAGCTTCTTCTGCAATGATGAGGGAACAGCAGCAAAGTCTCCATCGGCAAGGATCACTCACGATTCCGGCGCCTTTAAGCCGGAAAACCGTGGAGGAGGTTTGGTCTGAAATACATAATAAAGGGGAACAGACTCAGCAGCAACAGCAGCAACAGCATCAGCAGAGCAAGAGCAGCAACAGCAATGGCGGCATGCATACAGAGACTACTTATCGCCAGCCAACCTTTGGGGAGATGACTTTGGAGGATTTCTTGGTCAAAGCAGGGGTAGTTCGGGAACAATGTGCAATGCCGGGGATACCACCACCACTAGCAGCTTCTCATCACCATCACCATCCTCATCATCAGCAGCAGCAGTATGGGGTGTATTCTGGTAACAACTCTGCAGCAATGGCTCCTTCTTCTTTTGTTGGAAGGACTATTATCGGTGGTGCTGGTGGTGTGGTTGCGGCTGCTACACCATACCAGGCAGAGCCTTCTGGATACCCTGGGAGTAGTTGCAAGAGGGATGGTGGCGGCGGAGCATACCCTACACCGGGTTCTGCCGGCGGTGTTTGTTATGGAGAGAAGGTCGTCGAGCGACGGCAGCGGAGGATGATTAAGAACAGAGAATCTGCCGCTAGATCCAGAGCCAGAAAACAGGCGTACACAGTTGAATTAGAAGCAGAACTCAACCAACTGAGAGAAGAGAACGCCCAACTTAAACAGGCGCTGGCTGAGTTCGAAAAGAGAAGAAAGCAACAGTGTTGTGAGGAAATGAACGTTAGAGTTCAAACCAAAGCTCAGAAGGCAACAGAGAAATTGAGAGCATTGAGAAGGAACCAAAGTTGTCCTTTGTGA 951 0.4869 MNMDEFLSSIWNAEENQAIVNSSNNITNNNNNNTPVGEASSAMMREQQQSLHRQGSLTIPAPLSRKTVEEVWSEIHNKGEQTQQQQQQQHQQSKSSNSNGGMHTETTYRQPTFGEMTLEDFLVKAGVVREQCAMPGIPPPLAASHHHHHPHHQQQQYGVYSGNNSAAMAPSSFVGRTIIGGAGGVVAAATPYQAEPSGYPGSSCKRDGGGGAYPTPGSAGGVCYGEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAQLKQALAEFEKRRKQQCCEEMNVRVQTKAQKATEKLRALRRNQSCPL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02014 316 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 226 315 IPR043452 GO:0003700|GO:0045893
Aip06g02014 316 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 226 IPR043452 GO:0003700|GO:0045893
Aip06g02014 316 Gene3D - 229 284 - -
Aip06g02014 316 Coils Coil 291 311 - -
Aip06g02014 316 MobiDBLite consensus disorder prediction 22 62 - -
Aip06g02014 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 229 281 IPR004827 GO:0003700|GO:0006355
Aip06g02014 316 SUPERFAMILY Leucine zipper domain 231 280 IPR046347 GO:0003700|GO:0006355
Aip06g02014 316 SMART brlzneu 227 291 IPR004827 GO:0003700|GO:0006355
Aip06g02014 316 Pfam bZIP transcription factor 231 283 IPR004827 GO:0003700|GO:0006355
Aip06g02014 316 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 226 315 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Aip06g02014 316 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 1 226 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Aip06g02014 316 MobiDBLite consensus disorder prediction 77 112 - -
Aip06g02014 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 234 249 IPR004827 GO:0003700|GO:0006355
Aip06g02014 316 MobiDBLite consensus disorder prediction 22 61 - -
Aip06g02014 316 MobiDBLite consensus disorder prediction 138 157 - -
Aip06g02014 316 Coils Coil 247 288 - -
Aip06g02014 316 CDD bZIP_plant_BZIP46 231 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02014 Aip-Chr6 86692808 86694785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02014 1 286 bZIP Transcription Factor Family AT2G36270 43.220 2.13e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip06g02014 bZIP_1 5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02014 K14432 - gmx:100818567 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02014 06 86692808 86694785 Aip06g02014 06 86692808 86694785 ECH