Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02012 ATGAGGGATGAGGGTAACTTACCTGGACAACGGAAGAGAGATACAACTCCGGCAACAGAGGGAGCGGTAACGGCAGCTCTTCCAATGATGGCGGAGACAAAGAGAGCAACATTTGAGGCAACGAAATACTATACAGTGAAAATCCTTGTCTGTGGAGGCGGAGACGCGGAGGAGCCACTGGACGTCGCCGATGGAGTTTTCCAGCTGCATGGATATTTTTTTGAGTGCGGTGGTAGGGATGATGGTGAAGAGGCGTTTGATGAAGGTGTTGGCCAGGATCTCCTTCACTATGCTCGTCATGGTTTCGCCAATTTACAGCAAAACCAACAACAACTGAGAAGGAAAATGGCAATCGGAACCAGCAAAAGGATTTCCGCAGCGTCAGCGCGTGCTCACACTCGCAGGAACAAGAAAACTAACTCCTCCAACCTCCCCTCTGGACTTCTTGGAACAGCGATTATAGTGTTGTTCATTGGGTTTCTTTTTGGGGCCTATCAGGCTATTCAACCTCCTCCTCCCAAGATATGTGGCACTCCTGGTGCACCGCCTATAACAGCGCCGAGAATCAAACTAAGGGATGGAAGGAATTTAGCATACAAAGAACACGGCGTCCCAAAAGATGCTGCAAAGAATAAAATCATCTTTGTCCATGGTTTTGATTCTTGCAGGCATGATGCCTATATTGCCAAAACCTTATCACCAGATGTTGTTGAGGACTTGGGGATCTACATTGTGTCTTTTGATAGACCTGGTTATGGGGAAAGTGATCCTGATCCAAATCAAACAGGAAAGAGCCTGGCCCTAGATATTGAAGAATTTGCTGCTAAATTGGGATTAGGGCCTAAATTCTACATAATTGGTTACTCCTTGGGTGGGCAGATTGTTTGGAATTGCCTTAAGTATATCCCTGACAGACTGGCTGGTGCAGTGCTCATAGCCCCAGCTGTTAACTACTGGTGGTCGGGTCTTCCTGCAAACTTAAGTAGTGAAGTCTTTTACCAACAAAAGCTACAAGACCAATGGACAACTCGTGTTGCTCACTACATACCATGGCTAACTTACTGGTGGAACAGTCAAAGATGGTTTCCAGCATCAAGTTTAATTCTTCAAAGTACAGATCTTCTCTCCGTTCAAGACAAAGAACTGATGCCTAAGAGGGCTGATAGAAACAACCATGTGGCACAGGTAAGACAGCTAGGAGAACATGAAAGCGTCCACCGTGACTTAAATGTTGCATTTGGGAAGTGGGAATTCAGTCCTTTGGATTTGCAAAATCCATTTCCAACTAATGAAGGTTCAGTCCATATTTGGCAAGGAGATGACGATTTGATAGTGCCTGTTCAAGTGCAGCGTTACATAGCACAAAACCTTCCATGGATTCACTATCATGAGCTTCAAGGTGCCGGTCACTTGTTCCCTCATGCTGACGGTATGAGCGACACTATTGTTAAGTCACTCTTACAAGGGAAGGGTATGAAGAAATGGTCGAAGAAGCAGAATTATGCAGAGAAGGGCATAAGAAGATTGATTGTTGAAGCAGACTCCCAGAATGCCATTGACTGCATTAACAGATTCACAGGAGCTCAGTCCATAAACATATTACTGGAGCAAATTGCAGAGTACAAGAATAGACCGTGGGAGCTCAGATTCCACCATACATATAGGGAAGCTAATCAATGTGCGGATTAA 1689 0.4523 MRDEGNLPGQRKRDTTPATEGAVTAALPMMAETKRATFEATKYYTVKILVCGGGDAEEPLDVADGVFQLHGYFFECGGRDDGEEAFDEGVGQDLLHYARHGFANLQQNQQQLRRKMAIGTSKRISAASARAHTRRNKKTNSSNLPSGLLGTAIIVLFIGFLFGAYQAIQPPPPKICGTPGAPPITAPRIKLRDGRNLAYKEHGVPKDAAKNKIIFVHGFDSCRHDAYIAKTLSPDVVEDLGIYIVSFDRPGYGESDPDPNQTGKSLALDIEEFAAKLGLGPKFYIIGYSLGGQIVWNCLKYIPDRLAGAVLIAPAVNYWWSGLPANLSSEVFYQQKLQDQWTTRVAHYIPWLTYWWNSQRWFPASSLILQSTDLLSVQDKELMPKRADRNNHVAQVRQLGEHESVHRDLNVAFGKWEFSPLDLQNPFPTNEGSVHIWQGDDDLIVPVQVQRYIAQNLPWIHYHELQGAGHLFPHADGMSDTIVKSLLQGKGMKKWSKKQNYAEKGIRRLIVEADSQNAIDCINRFTGAQSINILLEQIAEYKNRPWELRFHHTYREANQCAD 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02012 562 Gene3D - 490 562 IPR036397 GO:0003676
Aip06g02012 562 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 116 493 - -
Aip06g02012 562 CDD RNase_H_like 503 562 IPR044730 -
Aip06g02012 562 MobiDBLite consensus disorder prediction 1 20 - -
Aip06g02012 562 Pfam alpha/beta hydrolase fold 213 471 IPR000073 -
Aip06g02012 562 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 116 493 - -
Aip06g02012 562 Gene3D alpha/beta hydrolase 178 489 IPR029058 -
Aip06g02012 562 MobiDBLite consensus disorder prediction 122 142 - -
Aip06g02012 562 Pfam Reverse transcriptase-like 503 562 IPR002156 GO:0003676|GO:0004523
Aip06g02012 562 SUPERFAMILY alpha/beta-Hydrolases 182 473 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02012 Aip-Chr6 86614048 86622974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02012 - - gmx:100776687 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02012 06 86614048 86622974 Aip06g02012 06 86614048 86622974 ECH
Aip06g02012 06 86614048 86622974 Aip08g00645 08 6049076 6053786 ECH