Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02001 ATGGACCTCTGCTCCAAGTGCTATAGAGATGTTCTCTTGAAGGAGCAAGAACAAGCCAAGACCAAATCCACCATCGAAACCGCTCTCTCCTCCTCCTCAGCCGCAGCTCATCCATCTCCGCCGCCTCCAGCCGTAGATTCCCTCCCTCAACCCTCACCGCTCATCGCCTTGGAATCGTCCGTATGGACGTCTCTAGCGGTTGGATCGGCAGTTCACACGAACCGATGCGCAGCATGCAGGAAACGGATCGGGTTGACCGGTTTTACATGTAGGTGCGGGATCACGTTTTGCGGGGCCCACAGGTACCCGGAGAAGCATGGGTGCGGGTTCGATTTCAAGACGGTAGGAAGGGACGAAATAGCGAGGGCGAATCCCGTGATCAAAGCCCAGAAGCTCGACAAGATTTGA 408 0.5588 MDLCSKCYRDVLLKEQEQAKTKSTIETALSSSSAAAHPSPPPPAVDSLPQPSPLIALESSVWTSLAVGSAVHTNRCAACRKRIGLTGFTCRCGITFCGAHRYPEKHGCGFDFKTVGRDEIARANPVIKAQKLDKI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02001 135 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 1 135 - -
Aip06g02001 135 Gene3D - 62 131 IPR035896 -
Aip06g02001 135 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 135 - -
Aip06g02001 135 SUPERFAMILY AN1-like Zinc finger 71 130 IPR035896 -
Aip06g02001 135 Pfam AN1-like Zinc finger 76 112 IPR000058 GO:0008270
Aip06g02001 135 ProSiteProfiles Zinc finger AN1-type profile. 70 116 IPR000058 GO:0008270
Aip06g02001 135 SMART AN1_Zf_4 76 113 IPR000058 GO:0008270
Aip06g02001 135 MobiDBLite consensus disorder prediction 23 50 - -
Aip06g02001 135 Gene3D - 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02001 Aip-Chr6 85413000 85413407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02001 1 135 C2H2 Transcription Factor Family AT3G52800 47.917 2.17e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02001 - - gmx:100527251 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02001 06 85413000 85413407 Aip06g02001 06 85413000 85413407 ECH