Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01996 ATGGGTCCATTGTCGAATCCTAACCTCCAATTTCAACCAACCATTGGGGGTAGTACCATTGGATCCACCATGCCATTAGAATCTTCGGGGATTTTGTCTCAATGTGTCAATGTTGGTGCCCCTTCTAGAGCTCCTCCCGGAGAACCGGTCAAAAAGAAGAGGGGTATGCCTAGGAAGTATGGGCCGGATGGAACCGTTTCACTGGCATTGACTCCAACGCCAGCTACTCATCCGAGAACCATGACACAACAAGGCCAAAAACAGGGTAGAAGTCGCCCCCCAGGGTCTAGGAAGAAACAGCAGCTGGCTTCTCTTGAAAAGAGCAAGGAATTGGCCACTTGCCAGGGTCAAATCAAGACCTTCAAGTTAACTGAGGCTCAAAAGGATAACGCCATAGAAGAGAATCTAGAAATCAAAAAACTGACAGATGAAAAGAAATGTGCATTGGCTACACAATATGCGGCAGGAGCAACTCTTAAAAGGGAGGAAAACAAAATCCCAGAGAAAATACACCGCCAAAAGATTTTGGAAGTTGAAAAGCTTAGCCAAACCATTCAAGAACTCGAGGAAACCATCTTAGAAAGCGGAGCCACTGCTAATGCCATTCGTGATTACCAATGGCAGATTTTTGAGCTGCTAGTAGGCATATCTTGA 654 0.4587 MGPLSNPNLQFQPTIGGSTIGSTMPLESSGILSQCVNVGAPSRAPPGEPVKKKRGMPRKYGPDGTVSLALTPTPATHPRTMTQQGQKQGRSRPPGSRKKQQLASLEKSKELATCQGQIKTFKLTEAQKDNAIEENLEIKKLTDEKKCALATQYAAGATLKREENKIPEKIHRQKILEVEKLSQTIQELEETILESGATANAIRDYQWQIFELLVGIS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01996 217 Coils Coil 171 198 - -
Aip06g01996 217 MobiDBLite consensus disorder prediction 69 98 - -
Aip06g01996 217 MobiDBLite consensus disorder prediction 1 36 - -
Aip06g01996 217 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-5 161 212 - -
Aip06g01996 217 MobiDBLite consensus disorder prediction 1 107 - -
Aip06g01996 217 Pfam Microtubule-associated protein 70 134 161 IPR009768 GO:0007010|GO:0008017
Aip06g01996 217 Pfam Microtubule-associated protein 70 161 212 IPR009768 GO:0007010|GO:0008017
Aip06g01996 217 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 105 161 IPR009768 GO:0007010|GO:0008017
Aip06g01996 217 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 161 212 IPR009768 GO:0007010|GO:0008017
Aip06g01996 217 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-5 105 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01996 Aip-Chr6 84996607 84998772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01996 50 105 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 54.386 1.98e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01996 - - lja:Lj1g3v2635090.1 158.303