Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01989 ATGAAGGTTATCGCCGCCTATCTCCTCGCTGTTATCGGCGGTAACACCTCCCCTTCCGCCGGCGACATCAAGGACATCCTCGGCTGCGTTGGAGCTGAAGCTGATAATGAAAGCATAACGCTTCTTTTGTCTGAAGTGAAAGGCAAAGACATAACAGAAGTCATTGCCGCTGGTAGGGAAAAGCTTGCTTCGGTGCCTGCCGGTGGTGGCGGTGCTGTGGCCGTTGCCGCTGCTCCTAGCGGAGGTGCTGCTGCTCCCTCAGCCTCCGAGTCAAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGATGATGATATGGGATTCAGTCTCTTTGACTAA 342 0.5292 MKVIAAYLLAVIGGNTSPSAGDIKDILGCVGAEADNESITLLLSEVKGKDITEVIAAGREKLASVPAGGGGAVAVAAAPSGGAAAPSASESKKEEKVEEKEESDDDMGFSLFD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01989 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 113 - -
Aip06g01989 113 Gene3D - 1 59 IPR038716 -
Aip06g01989 113 Pfam 60s Acidic ribosomal protein 17 112 - -
Aip06g01989 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Aip06g01989 113 MobiDBLite consensus disorder prediction 81 113 - -
Aip06g01989 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Aip06g01989 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01989 Aip-Chr6 84786031 84787095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01989 1 113 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.912 2.74e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01989 K02943 - tcc:18598192 128.642